PDB entry 3i3q
View 3i3q on RCSB PDB site
Description: Crystal Structure of AlkB in complex with Mn(II) and 2-oxoglutarate
Class: oxidoreductase
Keywords: beta jellyroll, Dioxygenase, DNA damage, DNA repair, Iron, Metal-binding, Oxidoreductase
Deposited on
2009-06-30, released
2009-08-25
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-11-01, with a file datestamp of
2017-10-27.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: N/A
AEROSPACI score: 0.53
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Alpha-ketoglutarate-dependent dioxygenase AlkB
Species: Escherichia coli [TaxId:83333]
Gene: aidD, alkB, b2212, JW2200
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3i3qa_ - Chain 'B':
Compound: Alpha-ketoglutarate-dependent dioxygenase AlkB
Species: Escherichia coli [TaxId:83333]
Gene: aidD, alkB, b2212, JW2200
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3i3qb_ - Heterogens: AKG, MN, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3i3qA (A:)
mqeplaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwt
thrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklsl
hqdkdepdlrapivsvslglpaifqfgglkrndplkrlllehgdvvvwggesrlfyhgiq
plkagfhpltidcrynltfrqagkkenlyfq
Sequence, based on observed residues (ATOM records): (download)
>3i3qA (A:)
eplaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwtth
rqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklslhq
dkdepdlrapivsvslglpaifqfgglkrndplkrlllehgdvvvwggesrlfyhgiqpl
kagfhpltidcrynltfrqagkk
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3i3qB (B:)
mqeplaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwt
thrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklsl
hqdkdepdlrapivsvslglpaifqfgglkrndplkrlllehgdvvvwggesrlfyhgiq
plkagfhpltidcrynltfrqagkkenlyfq
Sequence, based on observed residues (ATOM records): (download)
>3i3qB (B:)
qeplaagavilrrfafnaaeqlirdindvasqspfrqmvtpggytmsvamtncghlgwtt
hrqgylyspidpqtnkpwpampqsfhnlcqraataagypdfqpdaclinryapgaklslh
qdkdepdlrapivsvslglpaifqfgglkrndplkrlllehgdvvvwggesrlfyhgiqp
lkagfhpltidcrynltfrqagk