PDB entry 3dsz

View 3dsz on RCSB PDB site
Description: Engineered human lipocalin 2 in complex with Y-DTPA
Class: Transport Protein
Keywords: protein design, ligand binding protein, beta barrel, engineered lipocalin, de novo protein, protein binding, Transport Protein
Deposited on 2008-07-14, released 2009-05-19
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-05-19, with a file datestamp of 2009-05-15.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.213
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: engineered human lipocalin 2
    Species: Homo sapiens [TaxId:9606]
    Gene: LCN2, variant Tb7.N9
    Database cross-references and differences (RAF-indexed):
    • PDB 3DSZ
    Domains in SCOPe 2.04: d3dsza_
  • Chain 'B':
    Compound: engineered human lipocalin 2
    Species: Homo sapiens [TaxId:9606]
    Gene: LCN2, variant Tb7.N9
    Database cross-references and differences (RAF-indexed):
    • PDB 3DSZ
    Domains in SCOPe 2.04: d3dszb_
  • Heterogens: LIZ, YT3, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3dszA (A:)
qdstsdlipapplskvplqqnfqdnqfhgkwyqvgragnaalredkdpqkmtaqiyelke
dksynvtavrfrkkkcdyltmtfvpgsqpgeftlgniksypgltsylvrvvstnynqham
vffkkvsqnreyfsitllgrtkelaselkenfirfskslglpenhivfpvpidqcidgsa
hhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3dszA (A:)
lipapplskvplqqnfqdnqfhgkwyqvgragnaalredkdpqkmtaqiyelkedksynv
tavrfrkkkcdyltmtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvffkkv
sqnreyfsitllgrtkelaselkenfirfskslglpenhivfpvpidqcidg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3dszB (B:)
qdstsdlipapplskvplqqnfqdnqfhgkwyqvgragnaalredkdpqkmtaqiyelke
dksynvtavrfrkkkcdyltmtfvpgsqpgeftlgniksypgltsylvrvvstnynqham
vffkkvsqnreyfsitllgrtkelaselkenfirfskslglpenhivfpvpidqcidgsa
hhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3dszB (B:)
dlipapplskvplqqnfqdnqfhgkwyqvgragnaalredkdpqkmtaqiyelkedksyn
vtavrfrkkkcdyltmtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvffkk
vsqnreyfsitllgrtkelaselkenfirfskslglpenhivfpvpidqcidg