PDB entry 3dc5
View 3dc5 on RCSB PDB site
Description: Crystal Structure of a manganese superoxide dismutases from Caenorhabditis elegans
Class: oxidoreductase
Keywords: alpha hairpin N domain, alpha/beta C domain, OXIDOREDUCTASE, Manganese, Metal-binding, Mitochondrion, Transit peptide
Deposited on
2008-06-03, released
2009-06-09
The last revision prior to the SCOPe 2.06 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.191
AEROSPACI score: 0.55
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Superoxide dismutase [Mn] 2
Species: Caenorhabditis elegans [TaxId:6239]
Gene: sod-3, C08A9.1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3dc5a1, d3dc5a2 - Chain 'C':
Compound: Superoxide dismutase [Mn] 2
Species: Caenorhabditis elegans [TaxId:6239]
Gene: sod-3, C08A9.1
Database cross-references and differences (RAF-indexed):
- Uniprot P41977 (1-194)
- initiating methionine (0)
Domains in SCOPe 2.06: d3dc5c1, d3dc5c2, d3dc5c3 - Heterogens: MN, MLI, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3dc5A (A:)
mkhtlpdlpfdyadlepvisheimqlhhqkhhatyvnnlnqieeklheavskgnlkeaia
lqpalkfnggghinhsifwtnlakdggepskelmdtikrdfgsldnlqkrlsditiavqg
sgwgwlgyckkdkilkiatcanqdplegmvplfgidvwehayylqyknvrpdyvhaiwki
anwkniserfanarq
Sequence, based on observed residues (ATOM records): (download)
>3dc5A (A:)
khtlpdlpfdyadlepvisheimqlhhqkhhatyvnnlnqieeklheavskgnlkeaial
qpalkfnggghinhsifwtnlakdggepskelmdtikrdfgsldnlqkrlsditiavqgs
gwgwlgyckkdkilkiatcanqdplegmvplfgidvwehayylqyknvrpdyvhaiwkia
nwkniserfanarq
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>3dc5C (C:)
mkhtlpdlpfdyadlepvisheimqlhhqkhhatyvnnlnqieeklheavskgnlkeaia
lqpalkfnggghinhsifwtnlakdggepskelmdtikrdfgsldnlqkrlsditiavqg
sgwgwlgyckkdkilkiatcanqdplegmvplfgidvwehayylqyknvrpdyvhaiwki
anwkniserfanarq