PDB entry 3cyv

View 3cyv on RCSB PDB site
Description: Crystal structure of uroporphyrinogen decarboxylase from Shigella flexineri: new insights into its catalytic mechanism
Class: lyase
Keywords: alpha/beta barrel, Cytoplasm, Decarboxylase, Lyase, Porphyrin biosynthesis
Deposited on 2008-04-26, released 2009-04-28
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-04-28, with a file datestamp of 2009-04-24.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.227
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uroporphyrinogen decarboxylase
    Species: Shigella flexneri [TaxId:623]
    Gene: UROD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3cyva_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3cyvA (A:)
mtelkndrylrallrqpvdvtpvwmmrqagrylpeykatraqagdfmslcknaelacevt
lqplrrypldaailfsdiltvpdamglglyfeagegprftspvtckadvdklpipdpede
lgyvmnavrtirhelkgevpligfsgspwtlatymveggsskaftvikkmmyadpqalha
lldklaksvtlylnaqikagaqavmifdtwggvltgrdyqqfslyymhkivdgllrendg
rrvpvtlftkgggqwleamaetgcdalgldwttdiadarrrvgnkvalqgnmdpsmlyap
parieeevatilagfghgeghvfnlghgihqdvppehagvfveavhrlseqyhr

    Sequence, based on observed residues (ATOM records): (download) 
    >3cyvA (A:)
elkndrylrallrqpvdvtpvwmmrqagrylpeykatraqagdfmslcknaelacevtlq
plrrypldaailfsdiltvpdamglglyfeagegprftspvtckadvdklpipdpedelg
yvmnavrtirhelkgevpligfsgspwtlatymveggsskaftvikkmmyadpqalhall
dklaksvtlylnaqikagaqavmifdtwggvltgrdyqqfslyymhkivdgllrendgrr
vpvtlftkgggqwleamaetgcdalgldwttdiadarrrvgnkvalqgnmdpsmlyappa
rieeevatilagfghgeghvfnlghgihqdvppehagvfveavhrlseqyhr