PDB entry 3cmb

View 3cmb on RCSB PDB site
Description: Crystal structure of acetoacetate decarboxylase (YP_001047042.1) from Methanoculleus marisnigri JR1 at 1.60 A resolution
Class: lyase
Keywords: YP_001047042.1, Acetoacetate decarboxylase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, LYASE
Deposited on 2008-03-21, released 2008-04-01
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Acetoacetate decarboxylase
    Species: Methanoculleus marisnigri [TaxId:368407]
    Gene: YP_001047042.1, Memar_1128
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3CUL0 (19-282)
      • leader sequence (18)
    Domains in SCOPe 2.07: d3cmba1, d3cmba2
  • Chain 'B':
    Compound: Acetoacetate decarboxylase
    Species: Methanoculleus marisnigri [TaxId:368407]
    Gene: YP_001047042.1, Memar_1128
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3CUL0 (19-282)
      • leader sequence (17-18)
    Domains in SCOPe 2.07: d3cmbb2, d3cmbb3
  • Chain 'C':
    Compound: Acetoacetate decarboxylase
    Species: Methanoculleus marisnigri [TaxId:368407]
    Gene: YP_001047042.1, Memar_1128
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3CUL0 (19-282)
      • leader sequence (17-18)
    Domains in SCOPe 2.07: d3cmbc2, d3cmbc3
  • Chain 'D':
    Compound: Acetoacetate decarboxylase
    Species: Methanoculleus marisnigri [TaxId:368407]
    Gene: YP_001047042.1, Memar_1128
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3CUL0 (19-282)
      • leader sequence (18)
    Domains in SCOPe 2.07: d3cmbd2, d3cmbd3
  • Heterogens: NA, CL, P33, PEG, PE8, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3cmbA (A:)
mgsdkihhhhhhenlyfqgmfrpqddftylmpvhfgggkfdpetlvtqkatalslsfete
rdllenyipegfellapevqvafnkfteinwlhggqynlinvaapvrfhgkkdeldgayt
lvvwenktapilggreqtgipkiyadiedlhivrphfattvsyegntflnmdfeatgsit
grdldalksqfltmntlgwryipkvgapgaelsqfvlypqgmevetaevgkgslkwtelt
pmqspaqyyivnslaslpikrvtqavlvegrailramgarvie

    Sequence, based on observed residues (ATOM records): (download) 
    >3cmbA (A:)
gmfrpqddftylmpvhfgggkfdpetlvtqkatalslsfeterdllenyipegfellape
vqvafnkfteinwlhggqynlinvaapvrfhgkkdeldgaytlvvwenktapilggreqt
gipkiyadiedlhivrphfattvsyegntflnmdfeatgsitgrdldalksqfltmntlg
wryipkvgapgaelsqfvlypqgmevetaevgkgslkwteltpmqspaqyyivnslaslp
ikrvtqavlvegrailramgarvie

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3cmbB (B:)
mgsdkihhhhhhenlyfqgmfrpqddftylmpvhfgggkfdpetlvtqkatalslsfete
rdllenyipegfellapevqvafnkfteinwlhggqynlinvaapvrfhgkkdeldgayt
lvvwenktapilggreqtgipkiyadiedlhivrphfattvsyegntflnmdfeatgsit
grdldalksqfltmntlgwryipkvgapgaelsqfvlypqgmevetaevgkgslkwtelt
pmqspaqyyivnslaslpikrvtqavlvegrailramgarvie

    Sequence, based on observed residues (ATOM records): (download) 
    >3cmbB (B:)
qgmfrpqddftylmpvhfgggkfdpetlvtqkatalslsfeterdllenyipegfellap
evqvafnkfteinwlhggqynlinvaapvrfhgkkdeldgaytlvvwenktapilggreq
tgipkiyadiedlhivrphfattvsyegntflnmdfeatgsitgrdldalksqfltmntl
gwryipkvgapgaelsqfvlypqgmevetaevgkgslkwteltpmqspaqyyivnslasl
pikrvtqavlvegrailramgarvie

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3cmbC (C:)
mgsdkihhhhhhenlyfqgmfrpqddftylmpvhfgggkfdpetlvtqkatalslsfete
rdllenyipegfellapevqvafnkfteinwlhggqynlinvaapvrfhgkkdeldgayt
lvvwenktapilggreqtgipkiyadiedlhivrphfattvsyegntflnmdfeatgsit
grdldalksqfltmntlgwryipkvgapgaelsqfvlypqgmevetaevgkgslkwtelt
pmqspaqyyivnslaslpikrvtqavlvegrailramgarvie

    Sequence, based on observed residues (ATOM records): (download) 
    >3cmbC (C:)
qgmfrpqddftylmpvhfgggkfdpetlvtqkatalslsfeterdllenyipegfellap
evqvafnkfteinwlhggqynlinvaapvrfhgkkdeldgaytlvvwenktapilggreq
tgipkiyadiedlhivrphfattvsyegntflnmdfeatgsitgrdldalksqfltmntl
gwryipkvgapgaelsqfvlypqgmevetaevgkgslkwteltpmqspaqyyivnslasl
pikrvtqavlvegrailramgarvie

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3cmbD (D:)
mgsdkihhhhhhenlyfqgmfrpqddftylmpvhfgggkfdpetlvtqkatalslsfete
rdllenyipegfellapevqvafnkfteinwlhggqynlinvaapvrfhgkkdeldgayt
lvvwenktapilggreqtgipkiyadiedlhivrphfattvsyegntflnmdfeatgsit
grdldalksqfltmntlgwryipkvgapgaelsqfvlypqgmevetaevgkgslkwtelt
pmqspaqyyivnslaslpikrvtqavlvegrailramgarvie

    Sequence, based on observed residues (ATOM records): (download) 
    >3cmbD (D:)
gmfrpqddftylmpvhfgggkfdpetlvtqkatalslsfeterdllenyipegfellape
vqvafnkfteinwlhggqynlinvaapvrfhgkkdeldgaytlvvwenktapilggreqt
gipkiyadiedlhivrphfattvsyegntflnmdfeatgsitgrdldalksqfltmntlg
wryipkvgapgaelsqfvlypqgmevetaevgkgslkwteltpmqspaqyyivnslaslp
ikrvtqavlvegrailramgarvie