PDB entry 3ca4

View 3ca4 on RCSB PDB site
Description: Sambucus nigra agglutinin II, tetragonal crystal form- complexed to lactose
Class: SUGAR BINDING PROTEIN, Plant Protein
Keywords: BETA-TREFOIL, RICIN-B DOMAIN, GLYCOSYLATION, LACTOSE, Glycoprotein, Lectin, SUGAR BINDING PROTEIN, Plant Protein
Deposited on 2008-02-19, released 2008-11-25
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: 0.133
AEROSPACI score: 0.65 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Agglutinin II
    Species: Sambucus nigra [TaxId:4202]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P33183 (0-End)
      • see remark 999 (223)
    Domains in SCOPe 2.05: d3ca4a1, d3ca4a2
  • Heterogens: NAG, LAT, SO4, ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ca4A (A:)
tsftrnivgrdglcvdvrngydtdgtplqlwpcgtqrnqrwtfdsddtirsmgkcmtang
lnngsnivifncstaaenaikwevpidgsiinpssglvmtapraasrtillledniyaas
qgwtvtnnvkpivasivgykemclqsngenngvwmedceatslqqqwalygdrtirvnst
rglcvttngynskdliiilkcqglpsqrwffnsdgaivnpksrlvmdvrasnvslreiii
fpatgnpnqqwvtqvlps

    Sequence, based on observed residues (ATOM records): (download) 
    >3ca4A (A:)
tsftrnivgrdglcvdvrngydtdgtplqlwpcgtqrnqrwtfdsddtirsmgkcmtang
lnngsnivifncstaaenaikwevpidgsiinpssglvmtapraasrtillledniyaas
qgwtvtnnvkpivasivgykemclqsngenngvwmedceatslqqqwalygdrtirvnst
rglcvttngynskdliiilkcqglpsqrwffnsdgaivnpksrlvmdvrasnvslreiii
fpatgnpnqqwvtqvlp