PDB entry 3bti
View 3bti on RCSB PDB site
Description: crystal structure of QacR(E58Q) bound to berberine
Class: transcription
Keywords: QacR, multidrug binding, Berberine, natural drug, DNA-binding, Plasmid, Repressor, Transcription, Transcription regulation
Deposited on
2007-12-28, released
2008-08-12
The last revision prior to the SCOPe 2.02 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.85 Å
R-factor: 0.217
AEROSPACI score: 0.24
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: HTH-type transcriptional regulator qacR
Species: Staphylococcus aureus
Gene: qacR
Database cross-references and differences (RAF-indexed):
- Uniprot P0A0N3
- engineered (57)
- engineered (71)
- engineered (140)
Domains in SCOPe 2.02: d3btia1, d3btia2 - Chain 'B':
Compound: HTH-type transcriptional regulator qacR
Species: Staphylococcus aureus
Gene: qacR
Database cross-references and differences (RAF-indexed):
- Uniprot P0A0N3
- engineered (57)
- engineered (71)
- engineered (140)
Domains in SCOPe 2.02: d3btib1, d3btib2 - Chain 'D':
Compound: HTH-type transcriptional regulator qacR
Species: Staphylococcus aureus
Gene: qacR
Database cross-references and differences (RAF-indexed):
- Uniprot P0A0N3
- engineered (57)
- engineered (71)
- engineered (140)
Domains in SCOPe 2.02: d3btid1, d3btid2 - Chain 'E':
Compound: HTH-type transcriptional regulator qacR
Species: Staphylococcus aureus
Gene: qacR
Database cross-references and differences (RAF-indexed):
- Uniprot P0A0N3
- engineered (57)
- engineered (71)
- engineered (140)
Domains in SCOPe 2.02: d3btie1, d3btie2 - Heterogens: SO4, BER, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3btiA (A:)
mnlkdkilgvakelfikngynatttgeivklsesskgnlyyhfktkenlfleilnieqsk
wqeqwkkeqikaktnrekfylynelsltteyyyplqnaiiefyteyyktnsinekmnkle
nkyidayhvifkegnlngewsindvnavskiaanavngivtftheqnineriklmnkfsq
iflnglsk
Sequence, based on observed residues (ATOM records): (download)
>3btiA (A:)
nlkdkilgvakelfikngynatttgeivklsesskgnlyyhfktkenlfleilnieqskw
qeqwkkeqikaktnrekfylynelsltteyyyplqnaiiefyteyyktnsinekmnklen
kyidayhvifkegnlngewsindvnavskiaanavngivtftheqnineriklmnkfsqi
flngls
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3btiB (B:)
mnlkdkilgvakelfikngynatttgeivklsesskgnlyyhfktkenlfleilnieqsk
wqeqwkkeqikaktnrekfylynelsltteyyyplqnaiiefyteyyktnsinekmnkle
nkyidayhvifkegnlngewsindvnavskiaanavngivtftheqnineriklmnkfsq
iflnglsk
Sequence, based on observed residues (ATOM records): (download)
>3btiB (B:)
nlkdkilgvakelfikngynatttgeivklsesskgnlyyhfktkenlfleilnieqskw
qeqwkkeqikaktnrekfylynelsltteyyyplqnaiiefyteyyktnsinekmnklen
kyidayhvifkegnlngewsindvnavskiaanavngivtftheqnineriklmnkfsqi
flngls
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3btiD (D:)
mnlkdkilgvakelfikngynatttgeivklsesskgnlyyhfktkenlfleilnieqsk
wqeqwkkeqikaktnrekfylynelsltteyyyplqnaiiefyteyyktnsinekmnkle
nkyidayhvifkegnlngewsindvnavskiaanavngivtftheqnineriklmnkfsq
iflnglsk
Sequence, based on observed residues (ATOM records): (download)
>3btiD (D:)
nlkdkilgvakelfikngynatttgeivklsesskgnlyyhfktkenlfleilnieqskw
qeqwkkeqikaktnrekfylynelsltteyyyplqnaiiefyteyyktnsinekmnklen
kyidayhvifkegnlngewsindvnavskiaanavngivtftheqnineriklmnkfsqi
flngls
- Chain 'E':
Sequence, based on SEQRES records: (download)
>3btiE (E:)
mnlkdkilgvakelfikngynatttgeivklsesskgnlyyhfktkenlfleilnieqsk
wqeqwkkeqikaktnrekfylynelsltteyyyplqnaiiefyteyyktnsinekmnkle
nkyidayhvifkegnlngewsindvnavskiaanavngivtftheqnineriklmnkfsq
iflnglsk
Sequence, based on observed residues (ATOM records): (download)
>3btiE (E:)
nlkdkilgvakelfikngynatttgeivklsesskgnlyyhfktkenlfleilnieqskw
qeqwkkeqikaktnrekfylynelsltteyyyplqnaiiefyteyyktnsinekmnklen
kyidayhvifkegnlngewsindvnavskiaanavngivtftheqnineriklmnkfsqi
flngls