PDB entry 3bjg

View 3bjg on RCSB PDB site
Description: Structure of Rivax: A Human Ricin Vaccine
Class: hydrolase
Keywords: Ricin A Chain, toxin, Ribosome inactivating protein, vaccine, Glycoprotein, Hydrolase, Lectin, Plant defense, Protein synthesis inhibitor
Deposited on 2007-12-04, released 2008-12-16
Made obsolete by 3srp on 2019-09-04

The last revision prior to the SCOPe 2.06 freeze date was dated 2008-12-16, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.14 Å
R-factor: 0.208
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ricin A chain (rRNA N-glycosidase)
    Species: Ricinus communis [TaxId:3988]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P02879
      • engineered (76)
      • engineered (80)
    Domains in SCOPe 2.06: d3bjga_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3bjgA (A:)
aifpkqypiinfttagatvqsytnfiravrgrlttgadvrheipvlpnrvglpinqrfil
velsnhaelsvtlaldmtnaavvgyragnsayffhpdnqedaeaithlftdvqnrytfaf
ggnydrleqlagnlrenielgngpleeaisalyyystggtqlptlarsfiiciqmiseaa
rfqyiegemrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngsk
fsvydvsilipiialmvyrcapppssqf

    Sequence, based on observed residues (ATOM records): (download) 
    >3bjgA (A:)
qypiinfttagatvqsytnfiravrgrlttgadvrheipvlpnrvglpinqrfilvelsn
haelsvtlaldmtnaavvgyragnsayffhpdnqedaeaithlftdvqnrytfafggnyd
rleqlagnlrenielgngpleeaisalyyystggtqlptlarsfiiciqmiseaarfqyi
egemrtrirynrrsapdpsvitlenswgrlstaiqesnqgafaspiqlqrrngskfsvyd
vsilipiialmvyrcapppss