PDB entry 3W1K
View 3W1K on RCSB PDB site
Description: Crystal structure of the selenocysteine synthase SelA and tRNASec complex
Deposited on
2012-11-15, released
2013-06-05
The last revision was dated
2013-06-05, with a file datestamp of
2013-05-31.
Experiment type: XRAY
Resolution: 7.5 Å
R-factor: 0.194
AEROSPACI score: 0.06
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: L-seryl-tRNA(Sec) selenium transferase
Species: Aquifex aeolicus [TaxId:224324]
Gene: selA
Database cross-references and differences (RAF-indexed):
- Uniprot O67140 (0-451)
- engineered mutation (18)
- engineered mutation (20)
- engineered mutation (45)
- engineered mutation (47)
- Chain 'B':
Compound: L-seryl-tRNA(Sec) selenium transferase
Species: Aquifex aeolicus [TaxId:224324]
Gene: selA
Database cross-references and differences (RAF-indexed):
- Uniprot O67140 (0-451)
- engineered mutation (18)
- engineered mutation (20)
- engineered mutation (45)
- engineered mutation (47)
- Chain 'C':
Compound: L-seryl-tRNA(Sec) selenium transferase
Species: Aquifex aeolicus [TaxId:224324]
Gene: selA
Database cross-references and differences (RAF-indexed):
- Uniprot O67140 (0-451)
- engineered mutation (18)
- engineered mutation (20)
- engineered mutation (45)
- engineered mutation (47)
- Chain 'D':
Compound: L-seryl-tRNA(Sec) selenium transferase
Species: Aquifex aeolicus [TaxId:224324]
Gene: selA
Database cross-references and differences (RAF-indexed):
- Uniprot O67140 (0-451)
- engineered mutation (18)
- engineered mutation (20)
- engineered mutation (45)
- engineered mutation (47)
- Chain 'E':
Compound: L-seryl-tRNA(Sec) selenium transferase
Species: Aquifex aeolicus [TaxId:224324]
Gene: selA
Database cross-references and differences (RAF-indexed):
- Uniprot O67140 (0-451)
- engineered mutation (18)
- engineered mutation (20)
- engineered mutation (45)
- engineered mutation (47)
- Chain 'F':
Compound: selenocysteine tRNA
Species: Thermoanaerobacter tengcongensis MB4, synthetic [TaxId:273068]
- Chain 'G':
Compound: selenocysteine tRNA
Species: Thermoanaerobacter tengcongensis MB4, synthetic [TaxId:273068]
- Chain 'H':
Compound: selenocysteine tRNA
Species: Thermoanaerobacter tengcongensis MB4, synthetic [TaxId:273068]
- Chain 'I':
Compound: selenocysteine tRNA
Species: Thermoanaerobacter tengcongensis MB4, synthetic [TaxId:273068]
- Chain 'J':
Compound: selenocysteine tRNA
Species: Thermoanaerobacter tengcongensis MB4, synthetic [TaxId:273068]
PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.06, so the chain sequences below are not included in the ASTRAL sequence sets.
- Chain 'A':
Sequence; same for both SEQRES and ATOM records:
>3w1kA (A:)
mksllrqipqiskvveifakaypeiyvvkaarevaekyrkeiiegaradlngfledverk
ikslmkpnikrvinatgvvintnlgraplskdvinfiseiangysnleynleegkrgsri
ahiekylneltgaessfvvnnnagavflvlntlaegkeviisrgelveiggsfripdimk
ksgailrevgttnktkvsdyegainqntallmkvhksnfymegfveevkledlvklghky
giptyydagsgllinlkefgisvdepnfrdcislgidlvsgsgdkllggpqagiivgkkn
liekikknpiaralridkltlsglemtlklyfekryedipvirmltqdekalrqkakrle
kllkdipglkisvikdkakpgggslpelelptycvairhdrlssqelsrrlrlaeppivc
riredqllfdmrtvfhedlktikktlqellsi
- Chain 'B':
Sequence; same for both SEQRES and ATOM records:
>3w1kB (B:)
mksllrqipqiskvveifakaypeiyvvkaarevaekyrkeiiegaradlngfledverk
ikslmkpnikrvinatgvvintnlgraplskdvinfiseiangysnleynleegkrgsri
ahiekylneltgaessfvvnnnagavflvlntlaegkeviisrgelveiggsfripdimk
ksgailrevgttnktkvsdyegainqntallmkvhksnfymegfveevkledlvklghky
giptyydagsgllinlkefgisvdepnfrdcislgidlvsgsgdkllggpqagiivgkkn
liekikknpiaralridkltlsglemtlklyfekryedipvirmltqdekalrqkakrle
kllkdipglkisvikdkakpgggslpelelptycvairhdrlssqelsrrlrlaeppivc
riredqllfdmrtvfhedlktikktlqellsi
- Chain 'C':
Sequence; same for both SEQRES and ATOM records:
>3w1kC (C:)
mksllrqipqiskvveifakaypeiyvvkaarevaekyrkeiiegaradlngfledverk
ikslmkpnikrvinatgvvintnlgraplskdvinfiseiangysnleynleegkrgsri
ahiekylneltgaessfvvnnnagavflvlntlaegkeviisrgelveiggsfripdimk
ksgailrevgttnktkvsdyegainqntallmkvhksnfymegfveevkledlvklghky
giptyydagsgllinlkefgisvdepnfrdcislgidlvsgsgdkllggpqagiivgkkn
liekikknpiaralridkltlsglemtlklyfekryedipvirmltqdekalrqkakrle
kllkdipglkisvikdkakpgggslpelelptycvairhdrlssqelsrrlrlaeppivc
riredqllfdmrtvfhedlktikktlqellsi
- Chain 'D':
Sequence; same for both SEQRES and ATOM records:
>3w1kD (D:)
mksllrqipqiskvveifakaypeiyvvkaarevaekyrkeiiegaradlngfledverk
ikslmkpnikrvinatgvvintnlgraplskdvinfiseiangysnleynleegkrgsri
ahiekylneltgaessfvvnnnagavflvlntlaegkeviisrgelveiggsfripdimk
ksgailrevgttnktkvsdyegainqntallmkvhksnfymegfveevkledlvklghky
giptyydagsgllinlkefgisvdepnfrdcislgidlvsgsgdkllggpqagiivgkkn
liekikknpiaralridkltlsglemtlklyfekryedipvirmltqdekalrqkakrle
kllkdipglkisvikdkakpgggslpelelptycvairhdrlssqelsrrlrlaeppivc
riredqllfdmrtvfhedlktikktlqellsi
- Chain 'E':
Sequence; same for both SEQRES and ATOM records:
>3w1kE (E:)
mksllrqipqiskvveifakaypeiyvvkaarevaekyrkeiiegaradlngfledverk
ikslmkpnikrvinatgvvintnlgraplskdvinfiseiangysnleynleegkrgsri
ahiekylneltgaessfvvnnnagavflvlntlaegkeviisrgelveiggsfripdimk
ksgailrevgttnktkvsdyegainqntallmkvhksnfymegfveevkledlvklghky
giptyydagsgllinlkefgisvdepnfrdcislgidlvsgsgdkllggpqagiivgkkn
liekikknpiaralridkltlsglemtlklyfekryedipvirmltqdekalrqkakrle
kllkdipglkisvikdkakpgggslpelelptycvairhdrlssqelsrrlrlaeppivc
riredqllfdmrtvfhedlktikktlqellsi
- Chain 'F':
No sequence available.
- Chain 'G':
No sequence available.
- Chain 'H':
No sequence available.
- Chain 'I':
No sequence available.
- Chain 'J':
No sequence available.