PDB entry 2zo2

View 2zo2 on RCSB PDB site
Description: Mouse NP95 SRA domain non-specific DNA complex
Class: ligase/DNA
Keywords: base flipping, Cell cycle, Developmental protein, DNA damage, DNA repair, DNA-binding, Ligase, Metal-binding, Nucleus, Phosphoprotein, Transcription, Transcription regulation, Ubl conjugation, Ubl conjugation pathway, Zinc, Zinc-finger, LIGASE/DNA COMPLEX
Deposited on 2008-05-05, released 2008-09-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 3.09 Å
R-factor: 0.232
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Compound: E3 ubiquitin-protein ligase UHRF1
    Species: Mus musculus [TaxId:10090]
    Gene: Np95
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8VDF2 (2-End)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d2zo2b2, d2zo2b3
  • Chain 'D':
    Compound: DNA (5'-d(*dap*dap*dcp*dtp*dgp*dcp*dgp*dcp*dap*dgp*dtp*dt)-3')
  • Chain 'E':
    Compound: DNA (5'-d(*dap*dap*dcp*dtp*dgp*dcp*dgp*dcp*dap*dgp*dtp*dt)-3')
  • Heterogens: PO4

PDB Chain Sequences:

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2zo2B (B:)
hmpanhfgpipgvpvgtmwrfrvqvsesgvhrphvagihgrsndgayslvlaggyeddvd
ngnyftytgsggrdlsgnkrtagqssdqkltnnnralalnchspinekgaeaedwrqgkp
vrvvrnmkggkhskyapaegnrydgiykvvkywpergksgflvwryllrrddtepepwtr
egkdrtrqlgltmqypegylealankeksrkr

    Sequence, based on observed residues (ATOM records): (download) 
    >2zo2B (B:)
hmpanhfgpipgvpvgtmwrfrvqvsesgvhrphvagihgrsndgayslvlaggyeddvd
ngnyftytgsggrdgqssdqkltnnnralalnchspinekgaeaedwrqgkpvrvvrnmk
ggkhskyapaegnrydgiykvvkywpergksgflvwryllrrddtepepwtregkdrtrq
lgltmqypegylealankeks

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.