PDB entry 2zkg

View 2zkg on RCSB PDB site
Description: Crystal structure of unliganded SRA domain of mouse Np95
Class: ligase
Keywords: Protein-DNA interaction, Cell cycle, Developmental protein, DNA damage, DNA repair, DNA-binding, Ligase, Metal-binding, Nucleus, Phosphoprotein, Transcription, Transcription regulation, Ubl conjugation pathway, Zinc-finger
Deposited on 2008-03-19, released 2008-09-09
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.77 Å
R-factor: 0.188
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: E3 ubiquitin-protein ligase UHRF1
    Species: Mus musculus [TaxId:10090]
    Gene: Uhrf1, Np95
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2zkga_
  • Chain 'B':
    Compound: E3 ubiquitin-protein ligase UHRF1
    Species: Mus musculus [TaxId:10090]
    Gene: Uhrf1, Np95
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2zkgb_
  • Chain 'C':
    Compound: E3 ubiquitin-protein ligase UHRF1
    Species: Mus musculus [TaxId:10090]
    Gene: Uhrf1, Np95
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2zkgc_
  • Chain 'D':
    Compound: E3 ubiquitin-protein ligase UHRF1
    Species: Mus musculus [TaxId:10090]
    Gene: Uhrf1, Np95
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2zkgd_
  • Heterogens: EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2zkgA (A:)
sgmacvgrttectivpanhfgpipgvpvgtmwrfrvqvsesgvhrphvagihgrsndgay
slvlaggyeddvdngnyftytgsggrdlsgnkrtagqssdqkltnnnralalnchspine
kgaeaedwrqgkpvrvvrnmkggkhskyapaegnrydgiykvvkywpergksgflvwryl
lrrddtepepwtregkdrtrqlgltmqype

    Sequence, based on observed residues (ATOM records): (download) 
    >2zkgA (A:)
tectivpanhfgpipgvpvgtmwrfrvqvsesgvhrphvagihgrsndgayslvlaggye
ddvdngnyftytgsggqssdqkltnnnralalnchspinekgaeaedwrqgkpvrvvrnm
kggkhskyapaegnrydgiykvvkywpergksgflvwryllrrddtepepwtregkdrtr
qlgltmqype

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2zkgB (B:)
sgmacvgrttectivpanhfgpipgvpvgtmwrfrvqvsesgvhrphvagihgrsndgay
slvlaggyeddvdngnyftytgsggrdlsgnkrtagqssdqkltnnnralalnchspine
kgaeaedwrqgkpvrvvrnmkggkhskyapaegnrydgiykvvkywpergksgflvwryl
lrrddtepepwtregkdrtrqlgltmqype

    Sequence, based on observed residues (ATOM records): (download) 
    >2zkgB (B:)
tectivpanhfgpipgvpvgtmwrfrvqvsesgvhrphvagihgrsndgayslvlaggye
ddvdngnyftytgsggqssdqkltnnnralalnchspinekgaeaedwrqgkpvrvvrnm
kggkhskyapaegnrydgiykvvkywpergksgflvwryllrrddtepepwtregkdrtr
qlgltmqype

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2zkgC (C:)
sgmacvgrttectivpanhfgpipgvpvgtmwrfrvqvsesgvhrphvagihgrsndgay
slvlaggyeddvdngnyftytgsggrdlsgnkrtagqssdqkltnnnralalnchspine
kgaeaedwrqgkpvrvvrnmkggkhskyapaegnrydgiykvvkywpergksgflvwryl
lrrddtepepwtregkdrtrqlgltmqype

    Sequence, based on observed residues (ATOM records): (download) 
    >2zkgC (C:)
ctivpanhfgpipgvpvgtmwrfrvqvsesgvhrphvagihgrsndgayslvlaggyedd
vdngnyftytgsggsdqkltnnnralalnchspinekgaeaedwrqgkpvrvvrnmkggk
hskyapaegnrydgiykvvkywpergksgflvwryllrrddtepepwtregkdrtrqlgl
tmq

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2zkgD (D:)
sgmacvgrttectivpanhfgpipgvpvgtmwrfrvqvsesgvhrphvagihgrsndgay
slvlaggyeddvdngnyftytgsggrdlsgnkrtagqssdqkltnnnralalnchspine
kgaeaedwrqgkpvrvvrnmkggkhskyapaegnrydgiykvvkywpergksgflvwryl
lrrddtepepwtregkdrtrqlgltmqype

    Sequence, based on observed residues (ATOM records): (download) 
    >2zkgD (D:)
ctivpanhfgpipgvpvgtmwrfrvqvsesgvhrphvagihgrsndgayslvlaggyedd
vdngnyftytgsggqssdqkltnnnralalnchspinekgaeaedwrqgkpvrvvrnmkg
gkhskyapaegnrydgiykvvkywpergksgflvwryllrrddtepepwtregkdrtrql
gltm