PDB entry 2xgq

View 2xgq on RCSB PDB site
Description: structure of yeast DNA polymerase eta in complex with c8-n-acetyl-2-aminoanthracene containing DNA
Class: transferase/DNA
Keywords: transferase-DNA complex, translesion DNA synthesis, DNA-binding, DNA damage
Deposited on 2010-06-07, released 2010-11-03
The last revision prior to the SCOPe 2.04 freeze date was dated 2010-12-15, with a file datestamp of 2010-12-10.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.21951
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA Polymerase ETA
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q04049 (23-End)
      • expression tag (22)
    Domains in SCOPe 2.04: d2xgqa1, d2xgqa2
  • Chain 'B':
    Compound: DNA Polymerase ETA
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q04049 (23-End)
      • expression tag (21-22)
    Domains in SCOPe 2.04: d2xgqb1, d2xgqb2
  • Chain 'P':
    Compound: 5'-d(*gp*tp*gp*gp*ap*tp*gp*ap*g)-3'
  • Chain 'Q':
    Compound: 5'-d(*gp*tp*gp*gp*ap*tp*gp*ap*g)-3'
  • Chain 'T':
    Compound: 5'-d(*cp*8ag*cp*tp*cp*ap*tp*cp*cp*ap*c)-3'
  • Chain 'U':
    Compound: 5'-d(*cp*8ag*cp*tp*cp*ap*tp*cp*cp*ap*c)-3'
  • Heterogens: CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2xgqA (A:)
maswshpqfekgastslykkagrmskftwkeliqlgspskayesslaciahidmnaffaq
veqmrcglskedpvvcvqwnsiiavsyaarkygisrmdtiqealkkcsnlipihtavfkk
gedfwqyhdgcgswvqdpakqisvedhkvslepyrresrkalkifksacdlverasidev
fldlgricfnmlmfdneyeltgdlklkdalsnireafiggnydinshlplipekikslkf
egdvfnpegrdlitdwddvilalgsqvckgirdsikdilgyttscglsstknvcklasny
kkpdaqtivkndclldfldcgkfeitsfwtlggvlgkelidvldlphensikhiretwpd
nagqlkefldakvkqsdydrstsnidplktadlaeklfklsrgryglplssrpvvksmms
nknlrgkscnsivdciswlevfcaeltsriqdleqeynkiviprtvsislktksyevyrk
sgpvaykginfqshellkvgikfvtdldikgknksyypltklsmtitnfdiidlqk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xgqA (A:)
rmskftwkeliqlgspskayesslaciahidmnaffaqveqmrcglskedpvvcvqwnsi
iavsyaarkygisrmdtiqealkkcsnlipihtavfkkgedfwqyhdgcgswvqdpakqi
svedhkvslepyrresrkalkifksacdlverasidevfldlgricfnmlmfdneyeltg
dlklkdalsnireafiggnydinshlplipekikslkfegdvfnpegrdlitdwddvila
lgsqvckgirdsikdilgyttscglsstknvcklasnykkpdaqtivkndclldfldcgk
feitsfwtlggvlgkelidvldlphensikhiretwpdnagqlkefldakvkqsdydrst
snidplktadlaeklfklsrgryglplssrpvvksmmsnknlrgkscnsivdciswlevf
caeltsriqdleqeynkiviprtvsislktksyevyrksgpvaykginfqshellkvgik
fvtdldikgknksyypltklsmtitnfdiid

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2xgqB (B:)
maswshpqfekgastslykkagrmskftwkeliqlgspskayesslaciahidmnaffaq
veqmrcglskedpvvcvqwnsiiavsyaarkygisrmdtiqealkkcsnlipihtavfkk
gedfwqyhdgcgswvqdpakqisvedhkvslepyrresrkalkifksacdlverasidev
fldlgricfnmlmfdneyeltgdlklkdalsnireafiggnydinshlplipekikslkf
egdvfnpegrdlitdwddvilalgsqvckgirdsikdilgyttscglsstknvcklasny
kkpdaqtivkndclldfldcgkfeitsfwtlggvlgkelidvldlphensikhiretwpd
nagqlkefldakvkqsdydrstsnidplktadlaeklfklsrgryglplssrpvvksmms
nknlrgkscnsivdciswlevfcaeltsriqdleqeynkiviprtvsislktksyevyrk
sgpvaykginfqshellkvgikfvtdldikgknksyypltklsmtitnfdiidlqk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xgqB (B:)
grmskftwkeliqlgspskayesslaciahidmnaffaqveqmrcglskedpvvcvqwns
iiavsyaarkygisrmdtiqealkkcsnlipihtavfkkgedfwqyhdgcgswvqdpakq
isvedhkvslepyrresrkalkifksacdlverasidevfldlgricfnmlmfdneyelt
gdlklkdalsnireafiggnydinshlplipekikslkfegdvfnpegrdlitdwddvil
algsqvckgirdsikdilgyttscglsstknvcklasnykkpdaqtivkndclldfldcg
kfeitsfwtlggvlgkelidvldlphensikhiretwpdnagqlkefldakvkqsdydrs
tsnidplktadlaeklfklsrgryglplssrpvvksmmsnknlrgkscnsivdciswlev
fcaeltsriqdleqeynkiviprtvsislktksyevyrksgpvaykginfqshellkvgi
kfvtdldikgknksyypltklsmtitnfdiid

  • Chain 'P':
    No sequence available.

  • Chain 'Q':
    No sequence available.

  • Chain 'T':
    No sequence available.

  • Chain 'U':
    No sequence available.