PDB entry 2vyp

View 2vyp on RCSB PDB site
Description: rabbit-muscle g-actin in complex with myxobacterial rhizopodin
Class: contractile protein
Keywords: actin-cytoskeleton, polymerization inhibitor, dilactone, macrolide ring, polyketide, contractile protein
Deposited on 2008-07-25, released 2009-02-24
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-20.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: 0.189
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Actin, alpha skeletal muscle
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2vypa1, d2vypa2
  • Chain 'B':
    Compound: Actin, alpha skeletal muscle
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2vypb1, d2vypb2
  • Heterogens: ATP, CA, RH9, HEZ, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2vypA (A:)
mcdedettalvcdngsglvkagfagddapravfpsivgrprhqgvmvgmgqkdsyvgdea
qskrgiltlkypiehgiitnwddmekiwhhtfynelrvapeehptllteaplnpkanrek
mtqimfetfnvpamyvaiqavlslyasgrttgivldsgdgvthnvpiyegyalphaimrl
dlagrdltdylmkiltergysfvttaereivrdikeklcyvaldfenemataasssslek
syelpdgqvitignerfrcpetlfqpsfigmesagihettynsimkcdidirkdlyannv
msggttmypgiadrmqkeitalapstmkikiiapperkysvwiggsilaslstfqqmwit
kqeydeagpsivhrkcf

    Sequence, based on observed residues (ATOM records): (download) 
    >2vypA (A:)
ttalvcdngsglvkagfagddapravfpsivgrpdsyvgdeaqskrgiltlkypiehgii
tnwddmekiwhhtfynelrvapeehptllteaplnpkanrekmtqimfetfnvpamyvai
qavlslyasgrttgivldsgdgvthnvpiyegyalphaimrldlagrdltdylmkilter
gysfvttaereivrdikeklcyvaldfenemataassssleksyelpdgqvitignerfr
cpetlfqpsfigmesagihettynsimkcdidirkdlyannvmsggttmypgiadrmqke
italapstmkikiiapperkysvwiggsilaslstfqqmwitkqeydeagpsivhrkc

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2vypB (B:)
mcdedettalvcdngsglvkagfagddapravfpsivgrprhqgvmvgmgqkdsyvgdea
qskrgiltlkypiehgiitnwddmekiwhhtfynelrvapeehptllteaplnpkanrek
mtqimfetfnvpamyvaiqavlslyasgrttgivldsgdgvthnvpiyegyalphaimrl
dlagrdltdylmkiltergysfvttaereivrdikeklcyvaldfenemataasssslek
syelpdgqvitignerfrcpetlfqpsfigmesagihettynsimkcdidirkdlyannv
msggttmypgiadrmqkeitalapstmkikiiapperkysvwiggsilaslstfqqmwit
kqeydeagpsivhrkcf

    Sequence, based on observed residues (ATOM records): (download) 
    >2vypB (B:)
talvcdngsglvkagfagddapravfppiehgiitnwddmekiwhhtfynelrvapeehp
tllteaplnpkanrekmtqimfetfnvpamyvaiqavlslyasgrttgivldsgdgvthn
vpiyegyalphaimrldlagrdltdylmkiltergysfvttaereivrdikeklcyvald
fenemataasleksyelpdgqvitignerfrcpetlfqpsfigmesagihettynsimkc
didirkdlyannvmsggttmypgiadrmqkeitalapstmkikiiapperkysvwiggsi
laslstfqqmwitkqeydeagpsivhrkcf