PDB entry 2q76
View 2q76 on RCSB PDB site
Description: Mouse anti-hen egg white lysozyme antibody F10.6.6 Fab fragment
Class: immune system
Keywords: Antibody, Fab fragment, lysozyme, affinity maturation, VH-VL interface., IMMUNE SYSTEM
Deposited on
2007-06-06, released
2008-03-18
The last revision prior to the SCOPe 2.07 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.196
AEROSPACI score: 0.43
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Fab F10.6.6 fragment Light Chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2q76a1, d2q76a2 - Chain 'B':
Compound: Fab F10.6.6 fragment Heavy Chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2q76b1 - Chain 'C':
Compound: Fab F10.6.6 fragment Light Chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2q76c1, d2q76c2 - Chain 'D':
Compound: Fab F10.6.6 fragment Heavy Chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2q76d1 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2q76A (A:)
dieltqspatlsvtpgdsvslscrasqsisnnlhwyqqkshesprllikytsqsmsgips
rfsgsgsgtdftlsinsvetedfgvyfcqqsgswprtfgggtkldikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrn
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2q76B (B:)
evqleqsgaelmkpgasvkisckatgytfttywiewikqrpghslewigeilpgsdstyy
nekvkgkvtftadassntaymqlssltsedsavyycargdgfyvywgqgttltvssastt
ppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytl
sssvtvpsspwpsetvtcnvahpasstkvdkkivpr
Sequence, based on observed residues (ATOM records): (download)
>2q76B (B:)
evqleqsgaelmkpgasvkisckatgytfttywiewikqrpghslewigeilpgsdstyy
nekvkgkvtftadassntaymqlssltsedsavyycargdgfyvywgqgttltvssastt
ppsvyplapgqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsss
vtvpsspwpsetvtcnvahpasstkvdkkivpr
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>2q76C (C:)
dieltqspatlsvtpgdsvslscrasqsisnnlhwyqqkshesprllikytsqsmsgips
rfsgsgsgtdftlsinsvetedfgvyfcqqsgswprtfgggtkldikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrn
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2q76D (D:)
evqleqsgaelmkpgasvkisckatgytfttywiewikqrpghslewigeilpgsdstyy
nekvkgkvtftadassntaymqlssltsedsavyycargdgfyvywgqgttltvssastt
ppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytl
sssvtvpsspwpsetvtcnvahpasstkvdkkivpr
Sequence, based on observed residues (ATOM records): (download)
>2q76D (D:)
evqleqsgaelmkpgasvkisckatgytfttywiewikqrpghslewigeilpgsdstyy
nekvkgkvtftadassntaymqlssltsedsavyycargdgfyvywgqgttltvssastt
ppsvyplapgsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssvtv
psspwpsetvtcnvahpasstkvdkkivpr