PDB entry 2pyd

View 2pyd on RCSB PDB site
Description: The crystal structure of Glycogen phosphorylase in complex with glucose at 100 K
Class: transferase
Keywords: glycogenolysis, inhibition, type 2 diabetes, transferase
Deposited on 2007-05-16, released 2008-04-01
The last revision prior to the SCOPe 2.07 freeze date was dated 2010-08-11, with a file datestamp of 2010-08-06.
Experiment type: XRAY
Resolution: 1.93 Å
R-factor: 0.193
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glycogen phosphorylase, muscle form
    Species: Oryctolagus cuniculus [TaxId:9986]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2pyda_
  • Heterogens: GLC, DMS, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2pydA (A:)
msrplsdqekrkqisvrglagvenvtelkknfnrhlhftlvkdrnvatprdyyfalahtv
rdhlvgrwirtqqhyyekdpkriyylslefymgrtlqntmvnlalenacdeatyqlgldm
eeleeieedaglgngglgrlaacfldsmatlglaaygygiryefgifnqkicggwqmeea
ddwlrygnpwekarpeftlpvhfygrvehtsqgakwvdtqvvlampydtpvpgyrnnvvn
tmrlwsakapndfnlkdfnvggyiqavldrnlaenisrvlypndnffegkelrlkqeyfv
vaatlqdiirrfksskfgcrdpvrtnfdafpdkvaiqlndthpslaipelmrvlvdlerl
dwdkawevtvktcaytnhtvlpealerwpvhlletllprhlqiiyeinqrflnrvaaafp
gdvdrlrrmslveegavkrinmahlciagshavngvarihseilkktifkdfyelephkf
qnktngitprrwlvlcnpglaeiiaerigeeyisdldqlrkllsyvddeafirdvakvkq
enklkfaaylereykvhinpnslfdvqvkriheykrqllnclhvitlynrikkepnkfvv
prtvmiggkaapgyhmakmiiklitaigdvvnhdpvvgdrlrviflenyrvslaekvipa
adlseqistagteasgtgnmkfmlngaltigtmdganvemaeeageenffifgmrvedvd
rldqrgynaqeyydripelrqiieqlssgffspkqpdlfkdivnmlmhhdrfkvfadyee
yvkcqervsalyknprewtrmvirniatsgkfssdrtiaqyareiwgvepsrqrlpapde
kip

    Sequence, based on observed residues (ATOM records): (download) 
    >2pydA (A:)
rkqisvrglagvenvtelkknfnrhlhftlvkdrnvatprdyyfalahtvrdhlvgrwir
tqqhyyekdpkriyylslefymgrtlqntmvnlalenacdeatyqlgldmeeleeieeda
glgngglgrlaacfldsmatlglaaygygiryefgifnqkicggwqmeeaddwlrygnpw
ekarpeftlpvhfygrvehtsqgakwvdtqvvlampydtpvpgyrnnvvntmrlwsakap
ndgyiqavldrnlaenisrvlypndnffegkelrlkqeyfvvaatlqdiirrfkssknfd
afpdkvaiqlndthpslaipelmrvlvdlerldwdkawevtvktcaytnhtvlpealerw
pvhlletllprhlqiiyeinqrflnrvaaafpgdvdrlrrmslveegavkrinmahlcia
gshavngvarihseilkktifkdfyelephkfqnktngitprrwlvlcnpglaeiiaeri
geeyisdldqlrkllsyvddeafirdvakvkqenklkfaaylereykvhinpnslfdvqv
kriheykrqllnclhvitlynrikkepnkfvvprtvmiggkaapgyhmakmiiklitaig
dvvnhdpvvgdrlrviflenyrvslaekvipaadlseqistagteasgtgnmkfmlngal
tigtmdganvemaeeageenffifgmrvedvdrldqrgynaqeyydripelrqiieqlss
gffspkqpdlfkdivnmlmhhdrfkvfadyeeyvkcqervsalyknprewtrmvirniat
sgkfssdrtiaqyareiwgvepsrqrlp