PDB entry 2ooy
View 2ooy on RCSB PDB site
Description: Crystal structure of the adenylate sensor from AMP-activated protein kinase complexed with ATP
Class: transferase
Keywords: AMPK, kinase, AMP, crystal structure
Deposited on
2007-01-26, released
2007-02-06
The last revision prior to the SCOP 1.75 freeze date was dated
2007-05-01, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 2.88 Å
R-factor: 0.195
AEROSPACI score: 0.17
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: SNF1-like protein kinase ssp2
Species: Schizosaccharomyces pombe
Gene: ssp2, SPCC74.03c
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d2ooya1 - Chain 'B':
Compound: SPCC1919.03c protein
Species: Schizosaccharomyces pombe
Gene: SPCC1919.03c
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d2ooyb1 - Chain 'C':
Compound: SNF1-like protein kinase ssp2
Species: Schizosaccharomyces pombe
Gene: ssp2, SPCC74.03c
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d2ooyc1 - Chain 'D':
Compound: SPCC1919.03c protein
Species: Schizosaccharomyces pombe
Gene: SPCC1919.03c
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d2ooyd1 - Chain 'E':
Compound: Hypothetical protein C1556.08c in chromosome I
Species: Schizosaccharomyces pombe
Gene: SPAC1556.08c, SPAC1F12.01c
Database cross-references and differences (RAF-indexed):
- Chain 'G':
Compound: Hypothetical protein C1556.08c in chromosome I
Species: Schizosaccharomyces pombe
Gene: SPAC1556.08c, SPAC1F12.01c
Database cross-references and differences (RAF-indexed):
- Heterogens: FLC, ATP, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2ooyA (A:)
sqstrkksrrnkwhfgvrcrgdapeillavyralqragaqftvpkpvngkyrsdmytiks
rweiphckregkntyayielqlyevmpgcfmldvksngykdiyshpertadhgmddlkss
fpfldlcamlvcklfsa
Sequence, based on observed residues (ATOM records): (download)
>2ooyA (A:)
srrnkwhfgvrcrgdapeillavyralqragaqftvpkpvngkyrsdmytiksrweiphc
kregkntyayielqlyevmpgcfmldvksngykdiyshpertadhgmddlkssfpfldlc
amlvcklfs
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2ooyB (B:)
mseseqysteipafltsntlqelklpkppslpphlekcilnsntaykedqsvlpnpnhvl
lnhlaaantqlgvlalsattryhrkyvttamfknfdv
Sequence, based on observed residues (ATOM records): (download)
>2ooyB (B:)
eqysteipafltsntlqelklpkppslpphlekcilnsntaykedqsvlpnpnhvllnhl
aaantqlgvlalsattryhrkyvttamfknfd
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2ooyC (C:)
sqstrkksrrnkwhfgvrcrgdapeillavyralqragaqftvpkpvngkyrsdmytiks
rweiphckregkntyayielqlyevmpgcfmldvksngykdiyshpertadhgmddlkss
fpfldlcamlvcklfsa
Sequence, based on observed residues (ATOM records): (download)
>2ooyC (C:)
nkwhfgvrcrgdapeillavyralqragaqftvpkpvngkyrsdmytiksrweiphckre
gkntyayielqlyevmpgcfmldvksngykdiyddlkssfpfldlcamlvcklfs
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2ooyD (D:)
mseseqysteipafltsntlqelklpkppslpphlekcilnsntaykedqsvlpnpnhvl
lnhlaaantqlgvlalsattryhrkyvttamfknfdv
Sequence, based on observed residues (ATOM records): (download)
>2ooyD (D:)
qysteipafltsntlqelklpkppslpphlekcilnsntaykedqsvlpnpnhvllnhla
aantqlgvlalsattryhrkyvttamfknfd
- Chain 'E':
No sequence available.
- Chain 'G':
No sequence available.