PDB entry 2odk

View 2odk on RCSB PDB site
Description: Putative prevent-host-death protein from Nitrosomonas europaea
Class: structural genomics, unknown function
Keywords: prevent-host-death protein, structural genomics, APC7367, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION
Deposited on 2006-12-22, released 2007-01-23
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: 0.135
AEROSPACI score: 0.75 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hypothetical protein
    Species: Nitrosomonas europaea [TaxId:915]
    Gene: NE2111
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q82T22 (2-End)
      • modified residue (2)
    Domains in SCOPe 2.07: d2odka1
  • Chain 'B':
    Compound: hypothetical protein
    Species: Nitrosomonas europaea [TaxId:915]
    Gene: NE2111
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2odkb_
  • Chain 'C':
    Compound: hypothetical protein
    Species: Nitrosomonas europaea [TaxId:915]
    Gene: NE2111
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q82T22 (2-End)
      • modified residue (2)
    Domains in SCOPe 2.07: d2odkc_
  • Chain 'D':
    Compound: hypothetical protein
    Species: Nitrosomonas europaea [TaxId:915]
    Gene: NE2111
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q82T22 (2-End)
      • cloning artifact (1)
      • modified residue (2)
    Domains in SCOPe 2.07: d2odkd2, d2odkd3
  • Heterogens: SO4, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2odkA (A:)
ghmhvwpvqdakarfsefldacitegpqivsrrgaeeavlvpigewrrlqaaarpslkql
llsdsartemlvpergkarrrqveplrgs

    Sequence, based on observed residues (ATOM records): (download) 
    >2odkA (A:)
mhvwpvqdakarfsefldacitegpqivsrrgaeeavlvpigewrrlqaaa

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2odkB (B:)
ghmhvwpvqdakarfsefldacitegpqivsrrgaeeavlvpigewrrlqaaarpslkql
llsdsartemlvpergkarrrqveplrgs

    Sequence, based on observed residues (ATOM records): (download) 
    >2odkB (B:)
hvwpvqdakarfsefldacitegpqivsrrgaeeavlvpigewrrlqaaa

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2odkC (C:)
ghmhvwpvqdakarfsefldacitegpqivsrrgaeeavlvpigewrrlqaaarpslkql
llsdsartemlvpergkarrrqveplrgs

    Sequence, based on observed residues (ATOM records): (download) 
    >2odkC (C:)
mhvwpvqdakarfsefldacitegpqivsrrgaeeavlvpigewrrlqaaa

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2odkD (D:)
ghmhvwpvqdakarfsefldacitegpqivsrrgaeeavlvpigewrrlqaaarpslkql
llsdsartemlvpergkarrrqveplrgs

    Sequence, based on observed residues (ATOM records): (download) 
    >2odkD (D:)
hmhvwpvqdakarfsefldacitegpqivsrrgaeeavlvpigewrrlqaaa