PDB entry 2ji1

View 2ji1 on RCSB PDB site
Description: x-ray structure of wild-type superoxide reductase from desulfoarculus baarsii
Class: oxidoreductase
Keywords: oxidoreductase, raman spectroscopy, superoxide reductase, intermediate trapping, microspectrophotometry, detoxification, electron transport, iron, transport, redox states, metal-binding
Deposited on 2007-02-24, released 2007-05-01
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.204
AEROSPACI score: 0.53 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: desulfoferrodoxin
    Species: DESULFOVIBRIO BAARSII [TaxId:887]
    Database cross-references and differences (RAF-indexed):
    • PDB 2JI1
    • Uniprot Q46495 (1-125)
    Domains in SCOPe 2.03: d2ji1a1, d2ji1a2
  • Chain 'B':
    Compound: desulfoferrodoxin
    Species: DESULFOVIBRIO BAARSII [TaxId:887]
    Database cross-references and differences (RAF-indexed):
    • PDB 2JI1
    • Uniprot Q46495 (1-125)
    Domains in SCOPe 2.03: d2ji1b1, d2ji1b2
  • Chain 'C':
    Compound: desulfoferrodoxin
    Species: DESULFOVIBRIO BAARSII [TaxId:887]
    Database cross-references and differences (RAF-indexed):
    • PDB 2JI1
    • Uniprot Q46495 (1-125)
    Domains in SCOPe 2.03: d2ji1c1, d2ji1c2
  • Chain 'D':
    Compound: desulfoferrodoxin
    Species: DESULFOVIBRIO BAARSII [TaxId:887]
    Database cross-references and differences (RAF-indexed):
    • PDB 2JI1
    • Uniprot Q46495 (1-125)
    Domains in SCOPe 2.03: d2ji1d1, d2ji1d2
  • Heterogens: FE, CA, FE2, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2ji1A (A:)
mperlqvykcevcgnivevlnggigelvccnqdmklmsentvdaakekhvpviekidggy
kvkvgavahpmeekhyiqwielladdkcytqflkpgqapeavflieaakvvareycnihg
hwkaen

    Sequence, based on observed residues (ATOM records): (download) 
    >2ji1A (A:)
perlqvykcevcgnivevlnggigelvccnqdmklmsentvdaakekhvpviekidggyk
vkvgavahpmeekhyiqwielladdkcytqflkpgqapeavflieaakvvareycnihgh
wkaen

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2ji1B (B:)
mperlqvykcevcgnivevlnggigelvccnqdmklmsentvdaakekhvpviekidggy
kvkvgavahpmeekhyiqwielladdkcytqflkpgqapeavflieaakvvareycnihg
hwkaen

    Sequence, based on observed residues (ATOM records): (download) 
    >2ji1B (B:)
perlqvykcevcgnivevlnggigelvccnqdmklmsentvdaakekhvpviekidggyk
vkvgavahpmeekhyiqwielladdkcytqflkpgqapeavflieaakvvareycnihgh
wkaen

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2ji1C (C:)
mperlqvykcevcgnivevlnggigelvccnqdmklmsentvdaakekhvpviekidggy
kvkvgavahpmeekhyiqwielladdkcytqflkpgqapeavflieaakvvareycnihg
hwkaen

    Sequence, based on observed residues (ATOM records): (download) 
    >2ji1C (C:)
perlqvykcevcgnivevlnggigelvccnqdmklmsentvdaakekhvpviekidggyk
vkvgavahpmeekhyiqwielladdkcytqflkpgqapeavflieaakvvareycnihgh
wkaen

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2ji1D (D:)
mperlqvykcevcgnivevlnggigelvccnqdmklmsentvdaakekhvpviekidggy
kvkvgavahpmeekhyiqwielladdkcytqflkpgqapeavflieaakvvareycnihg
hwkaen

    Sequence, based on observed residues (ATOM records): (download) 
    >2ji1D (D:)
perlqvykcevcgnivevlnggigelvccnqdmklmsentvdaakekhvpviekidggyk
vkvgavahpmeekhyiqwielladdkcytqflkpgqapeavflieaakvvareycnihgh
wkaen