PDB entry 2idk

View 2idk on RCSB PDB site
Description: Crystal Structure of Rat Glycine N-Methyltransferase Complexed With Folate
Class: transferase
Keywords: Glycine N-Methyltransferase, rat, folate binding
Deposited on 2006-09-15, released 2006-12-19
The last revision prior to the SCOPe 2.02 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.55 Å
R-factor: 0.24
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: glycine n-methyltransferase
    Species: Rattus norvegicus [TaxId:10116]
    Gene: GNMT
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d2idka_
  • Chain 'B':
    Compound: glycine n-methyltransferase
    Species: Rattus norvegicus [TaxId:10116]
    Gene: GNMT
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d2idkb_
  • Chain 'C':
    Compound: glycine n-methyltransferase
    Species: Rattus norvegicus [TaxId:10116]
    Gene: GNMT
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d2idkc_
  • Chain 'D':
    Compound: glycine n-methyltransferase
    Species: Rattus norvegicus [TaxId:10116]
    Gene: GNMT
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d2idkd_
  • Heterogens: C2F, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2idkA (A:)
vdsvyrtrslgvaaegipdqyadgeaarvwqlyigdtrsrtaeykawllgllrqhgchrv
ldvacgtgvdsimlveegfsvtsvdasdkmlkyalkerwnrrkepafdkwvieeanwltl
dkdvpagdgfdaviclgnsfahlpdskgdqsehrlalkniasmvrpggllvidhrnydyi
lstgcappgkniyyksdltkdittsvltvnnkahmvtldytvqvpgagrdgapgfskfrl
syyphclasftelvqeafggrcqhsvlgdfkpyrpgqayvpcyfihvlkktg

    Sequence, based on observed residues (ATOM records): (download) 
    >2idkA (A:)
dsvyrtrslgvaaegipdqyadgeaarvwqlyigdtrsrtaeykawllgllrqhgchrvl
dvacgtgvdsimlveegfsvtsvdasdkmlkyalkerwnrrkepafdkwvieeanwltld
kdvpagdgfdaviclgnsfahlpdskgdqsehrlalkniasmvrpggllvidhrnydyil
stgcappgkniyykskdittsvltvnnkahmvtldytvqfskfrlsyyphclasftelvq
eafggrcqhsvlgdfkpyrpgqayvpcyfihvlkktg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2idkB (B:)
vdsvyrtrslgvaaegipdqyadgeaarvwqlyigdtrsrtaeykawllgllrqhgchrv
ldvacgtgvdsimlveegfsvtsvdasdkmlkyalkerwnrrkepafdkwvieeanwltl
dkdvpagdgfdaviclgnsfahlpdskgdqsehrlalkniasmvrpggllvidhrnydyi
lstgcappgkniyyksdltkdittsvltvnnkahmvtldytvqvpgagrdgapgfskfrl
syyphclasftelvqeafggrcqhsvlgdfkpyrpgqayvpcyfihvlkktg

    Sequence, based on observed residues (ATOM records): (download) 
    >2idkB (B:)
vdsvyrtrslgvaaegipdqyadgeaarvwqlyigdtrsrtaeykawllgllrqhgchrv
ldvacgtgvdsimlveegfsvtsvdasdkmlkyalkerwnrrkepafdkwvieeanwltl
dkdvpagdgfdaviclgnsfahlpdskgdqsehrlalkniasmvrpggllvidhrnydyi
lstgcappgkniyyksdltkdittsvltvnnkahmvtldytvqvpgafskfrlsyyphcl
asftelvqeafggrcqhsvlgdfkpyrpgqayvpcyfihvlkktg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2idkC (C:)
vdsvyrtrslgvaaegipdqyadgeaarvwqlyigdtrsrtaeykawllgllrqhgchrv
ldvacgtgvdsimlveegfsvtsvdasdkmlkyalkerwnrrkepafdkwvieeanwltl
dkdvpagdgfdaviclgnsfahlpdskgdqsehrlalkniasmvrpggllvidhrnydyi
lstgcappgkniyyksdltkdittsvltvnnkahmvtldytvqvpgagrdgapgfskfrl
syyphclasftelvqeafggrcqhsvlgdfkpyrpgqayvpcyfihvlkktg

    Sequence, based on observed residues (ATOM records): (download) 
    >2idkC (C:)
vdsvyrtrslgvaaegipdqyadgeaarvwqlyigdtrsrtaeykawllgllrqhgchrv
ldvacgtgvdsimlveegfsvtsvdasdkmlkyalkerwnrrkepafdkwvieeanwltl
dkdvpagdgfdaviclgnsfahlpdskgdqsehrlalkniasmvrpggllvidhrnydyi
lstgcappgkniyyksdltkdittsvltvnnkahmvtldytvqfskfrlsyyphclasft
elvqeafggrcqhsvlgdfkpyrpgqayvpcyfihvlkktg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2idkD (D:)
vdsvyrtrslgvaaegipdqyadgeaarvwqlyigdtrsrtaeykawllgllrqhgchrv
ldvacgtgvdsimlveegfsvtsvdasdkmlkyalkerwnrrkepafdkwvieeanwltl
dkdvpagdgfdaviclgnsfahlpdskgdqsehrlalkniasmvrpggllvidhrnydyi
lstgcappgkniyyksdltkdittsvltvnnkahmvtldytvqvpgagrdgapgfskfrl
syyphclasftelvqeafggrcqhsvlgdfkpyrpgqayvpcyfihvlkktg

    Sequence, based on observed residues (ATOM records): (download) 
    >2idkD (D:)
vdsvyrtrslgvaaegipdqyadgeaarvwqlyigdtrsrtaeykawllgllrqhgchrv
ldvacgtgvdsimlveegfsvtsvdasdkmlkyalkerwnrrkepafdkwvieeanwltl
dkdvpagdgfdaviclgnsfahlpdskgdqsehrlalkniasmvrpggllvidhrnydyi
lstgcappgkniyyksdltkdittsvltvnnkahmvtldytvqvpgapgfskfrlsyyph
clasftelvqeafggrcqhsvlgdfkpyrpgqayvpcyfihvlkktg