PDB entry 2hdo

View 2hdo on RCSB PDB site
Description: Crystal structure of putative phosphoglycolate phosphatase (np_784602.1) from Lactobacillus plantarum at 1.50 A resolution
Class: hydrolase
Keywords: np_784602.1, putative phosphoglycolate phosphatase, Structural Genomics, PSI-2, Protein Structure Initiative, Joint Center for Structural Genomics, JCSG
Deposited on 2006-06-20, released 2006-08-15
The last revision prior to the SCOP 1.73 freeze date was dated 2006-08-15, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: 0.178
AEROSPACI score: 0.63 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphoglycolate phosphatase
    Species: Lactobacillus plantarum
    Gene: np_784602.1, gph1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q88YA8 (1-End)
      • modified residue (1)
      • modified residue (7)
      • modified residue (25)
      • modified residue (47)
      • modified residue (53)
      • modified residue (74)
      • modified residue (115)
      • modified residue (121-122)
      • modified residue (124)
      • modified residue (184)
    Domains in SCOP 1.73: d2hdoa1
  • Heterogens: PO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2hdoA (A:)
gmtyqalmfdidgtltnsqpayttvmrevlatygkpfspaqaqktfpmaaeqamtelgia
asefdhfqaqyedvmashydqielypgitslfeqlpselrlgivtsqrrnelesgmrsyp
fmmrmavtisaddtpkrkpdplplltalekvnvapqnalfigdsvsdeqtaqaanvdfgl
avwgmdpnadhqkvahrfqkpldilelfk

    Sequence, based on observed residues (ATOM records): (download) 
    >2hdoA (A:)
mtyqalmfdidgtltnsqpayttvmrevlatygkpfspaqaqktfpmaaeqamtelgiaa
sefdhfqaqyedvmashydqielypgitslfeqlpselrlgivtsqrrnelesgmrsypf
mmrmavtisaddtpkrkpdplplltalekvnvapqnalfigdsvsdeqtaqaanvdfgla
vwgmdpnadhqkvahrfqkpldilelf