PDB entry 2gp3

View 2gp3 on RCSB PDB site
Description: Crystal structure of the catalytic core domain of jmjd2a
Class: metal binding protein
Keywords: BETA BARREL, Zinc finger, METAL BINDING PROTEIN
Deposited on 2006-04-16, released 2006-05-23
The last revision prior to the SCOPe 2.04 freeze date was dated 2013-11-27, with a file datestamp of 2013-11-22.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: 0.247
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Jumonji domain-containing protein 2A
    Species: Homo sapiens [TaxId:9606]
    Gene: JMJD2A
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d2gp3a_
  • Chain 'B':
    Compound: Jumonji domain-containing protein 2A
    Species: Homo sapiens [TaxId:9606]
    Gene: JMJD2A
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d2gp3b_
  • Heterogens: ZN, FE2, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2gp3A (A:)
asesetlnpsarimtfyptmeefrnfsryiayiesqgahraglakvvppkewkprasydd
iddlvipapiqqlvtgqsglftqyniqkkamtvrefrkiansdkyctprysefeelerky
wknltfnppiygadvngtlyekhvdewnigrlrtildlvekesgitiegvntpylyfgmw
ktsfawhtedmdlysinylhfgepkswysvppehgkrlerlakgffpgsaqsceaflrhk
mtlisplmlkkygipfdkvtqeagefmitfpygyhagfnhgfncaestnfatrrwieygk
qavlcscrkdmvkismdvfvrkfqperyklwkagkdntvidhtlptpea

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2gp3B (B:)
asesetlnpsarimtfyptmeefrnfsryiayiesqgahraglakvvppkewkprasydd
iddlvipapiqqlvtgqsglftqyniqkkamtvrefrkiansdkyctprysefeelerky
wknltfnppiygadvngtlyekhvdewnigrlrtildlvekesgitiegvntpylyfgmw
ktsfawhtedmdlysinylhfgepkswysvppehgkrlerlakgffpgsaqsceaflrhk
mtlisplmlkkygipfdkvtqeagefmitfpygyhagfnhgfncaestnfatrrwieygk
qavlcscrkdmvkismdvfvrkfqperyklwkagkdntvidhtlptpea

    Sequence, based on observed residues (ATOM records): (download) 
    >2gp3B (B:)
psarimtfyptmeefrnfsryiayiesqgahraglakvvppkewkprasyddiddlvipa
piqqlvtgqsglftqyniqkkamtvrefrkiansdkyctprysefeelerkywknltfnp
piygadvngtlyekhvdewnigrlrtildlvekesgitiegvntpylyfgmwktsfawht
edmdlysinylhfgepkswysvppehgkrlerlakgffpgsaqsceaflrhkmtlisplm
lkkygipfdkvtqeagefmitfpygyhagfnhgfncaestnfatrrwieygkqavlcscr
kdmvkismdvfvrkfqperyklwkagkdntvidhtlptp