PDB entry 2gon
View 2gon on RCSB PDB site
Description: Xray Structure of Gag133-278
Class: viral protein
Keywords: HIV-1 CA, Capsid, Beta Hairpin, Gag, Immature, Mature, VIRAL PROTEIN
Deposited on
2006-04-13, released
2006-09-26
The last revision prior to the SCOPe 2.07 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.205
AEROSPACI score: 0.45
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Capsid protein p24 (CA)
Species: Human immunodeficiency virus 1 [TaxId:11676]
Gene: GAG
Database cross-references and differences (RAF-indexed):
- Uniprot P12497 (Start-145)
- modified residue (38)
- modified residue (54)
- modified residue (65)
- modified residue (67)
- modified residue (95)
- modified residue (117)
- modified residue (143)
Domains in SCOPe 2.07: d2gona_ - Chain 'B':
Compound: Capsid protein p24 (CA)
Species: Human immunodeficiency virus 1 [TaxId:11676]
Gene: GAG
Database cross-references and differences (RAF-indexed):
- Uniprot P12497 (Start-145)
- modified residue (9)
- modified residue (38)
- modified residue (54)
- modified residue (65)
- modified residue (67)
- engineered (91)
- modified residue (95)
- modified residue (117)
- modified residue (143)
Domains in SCOPe 2.07: d2gonb_ - Chain 'C':
Compound: Capsid protein p24 (CA)
Species: Human immunodeficiency virus 1 [TaxId:11676]
Gene: GAG
Database cross-references and differences (RAF-indexed):
- Uniprot P12497 (0-145)
- modified residue (9)
- modified residue (38)
- modified residue (54)
- modified residue (65)
- modified residue (67)
- modified residue (95)
- modified residue (117)
- modified residue (143)
Domains in SCOPe 2.07: d2gonc_ - Chain 'D':
Compound: Capsid protein p24 (CA)
Species: Human immunodeficiency virus 1 [TaxId:11676]
Gene: GAG
Database cross-references and differences (RAF-indexed):
- Uniprot P12497 (Start-145)
- modified residue (38)
- modified residue (54)
- modified residue (65)
- modified residue (67)
- modified residue (95)
- modified residue (117)
- modified residue (143)
Domains in SCOPe 2.07: d2gond_ - Heterogens: FLC, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2gonA (A:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiepgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmys
Sequence, based on observed residues (ATOM records): (download)
>2gonA (A:)
hqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvgghqaamqmlke
tineeaaewdrlhpvhmreprgsdiagttstlqeqigwmthnppipvgeiykrwiilgln
kivrmys
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2gonB (B:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiepgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmys
Sequence, based on observed residues (ATOM records): (download)
>2gonB (B:)
mvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvgghqaamqml
ketineeaaewdrlhpvhagpiepgqmreprgsdiagttstlqeqigwmthnppipvgei
ykrwiilglnkivrmys
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2gonC (C:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiepgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmys
Sequence, based on observed residues (ATOM records): (download)
>2gonC (C:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhmreprgsdiagttstlqeqigwmthnppipvge
iykrwiilglnkivrmys
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2gonD (D:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiepgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmys
Sequence, based on observed residues (ATOM records): (download)
>2gonD (D:)
qaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvgghqaamqmlket
ineeaaewdrlhpvhpgqmreprgsdiagttstlqeqigwmthnppipvgeiykrwiilg
lnkivrmys