PDB entry 2gb3

View 2gb3 on RCSB PDB site
Description: Crystal structure of Aspartate aminotransferase (tm1698) from Thermotoga maritima at 2.50 A resolution
Class: transferase
Keywords: tm1698, Aspartate aminotransferase, Structural Genomics, PSI, Protein Structure Initiative, Joint Center for Structural Genomics, JCSG
Deposited on 2006-03-09, released 2006-03-21
The last revision prior to the SCOP 1.75 freeze date was dated 2006-03-21, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.231
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: aspartate aminotransferase
    Species: Thermotoga maritima
    Gene: tm1698
    Database cross-references and differences (RAF-indexed):
    • GB AAD36765
      • modified residue (36)
      • modified residue (156)
      • modified residue (195)
      • modified residue (243)
      • modified residue (267)
      • modified residue (346)
      • modified residue (352)
      • modified residue (358)
      • modified residue (395)
      • modified residue (400)
    Domains in SCOP 1.75: d2gb3a1
  • Chain 'B':
    Compound: aspartate aminotransferase
    Species: Thermotoga maritima
    Gene: tm1698
    Database cross-references and differences (RAF-indexed):
    • GB AAD36765 (12-End)
      • leader sequence (10-11)
      • modified residue (12)
      • modified residue (36)
      • modified residue (156)
      • modified residue (195)
      • modified residue (243)
      • modified residue (267)
      • modified residue (346)
      • modified residue (352)
      • modified residue (358)
      • modified residue (395)
      • modified residue (400)
    Domains in SCOP 1.75: d2gb3b1
  • Chain 'C':
    Compound: aspartate aminotransferase
    Species: Thermotoga maritima
    Gene: tm1698
    Database cross-references and differences (RAF-indexed):
    • GB AAD36765
      • modified residue (36)
      • modified residue (156)
      • modified residue (195)
      • modified residue (243)
      • modified residue (267)
      • modified residue (346)
      • modified residue (352)
      • modified residue (358)
      • modified residue (395)
      • modified residue (400)
    Domains in SCOP 1.75: d2gb3c1
  • Chain 'D':
    Compound: aspartate aminotransferase
    Species: Thermotoga maritima
    Gene: tm1698
    Database cross-references and differences (RAF-indexed):
    • GB AAD36765 (12-End)
      • modified residue (12)
      • modified residue (36)
      • modified residue (156)
      • modified residue (195)
      • modified residue (243)
      • modified residue (267)
      • modified residue (346)
      • modified residue (352)
      • modified residue (358)
      • modified residue (395)
      • modified residue (400)
    Domains in SCOP 1.75: d2gb3d1
  • Chain 'E':
    Compound: aspartate aminotransferase
    Species: Thermotoga maritima
    Gene: tm1698
    Database cross-references and differences (RAF-indexed):
    • GB AAD36765 (12-End)
      • leader sequence (10-11)
      • modified residue (12)
      • modified residue (36)
      • modified residue (156)
      • modified residue (195)
      • modified residue (243)
      • modified residue (267)
      • modified residue (346)
      • modified residue (352)
      • modified residue (358)
      • modified residue (395)
      • modified residue (400)
    Domains in SCOP 1.75: d2gb3e1
  • Chain 'F':
    Compound: aspartate aminotransferase
    Species: Thermotoga maritima
    Gene: tm1698
    Database cross-references and differences (RAF-indexed):
    • GB AAD36765
      • modified residue (36)
      • modified residue (156)
      • modified residue (195)
      • modified residue (243)
      • modified residue (267)
      • modified residue (346)
      • modified residue (352)
      • modified residue (358)
      • modified residue (395)
      • modified residue (400)
    Domains in SCOP 1.75: d2gb3f1
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2gb3A (A:)
mgsdkihhhhhhmdvfsdrvllteespirklvpfaemakkrgvrihhlnigqpdlktpev
fferiyenkpevvyyshsagiwelreafasyykrrqrvdvkpenvlvtnggseailfsfa
vianpgdeilvlepfyanynafakiagvklipvtrrmeegfaipqnlesfinertkgivl
snpcnptgvvygkdemrylveiaerhglflivdevyseivfrgefasalsiesdkvvvid
svskkfsacgarvgclitrneelishamklaqgrlapplleqigsvgllnlddsffdfvr
etyrervetvlkkleehglkrftkpsgafyitaelpvedaeefarwmltdfnmdgettmv
aplrgfyltpglgkkeiriacvlekdllsraidvlmeglkmfcssrisc

    Sequence, based on observed residues (ATOM records): (download) 
    >2gb3A (A:)
fsdrvllteespirklvpfaemakkrgvrihhlnigqpdlktpevfferiyenkpevvyy
shsagiwelreafasyykrrqrvdvkpenvlvtnggseailfsfavianpgdeilvlepf
yanynafakiagvklipvtrrmeegfaipqnlesfinertkgivlsnpcnptgvvygkde
mrylveiaerhglflivdevyseivfrgefasalsiesdkvvvidsvskkfsacgarvgc
litrneelishamklaqgrlapplleqigsvgllnlddsffdfvretyrervetvlkkle
ehglkrftkpsgafyitaelpvedaeefarwmltdfnmdgettmvaplrgfyltpglgkk
eiriacvlekdllsraidvlmeglkmfcs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2gb3B (B:)
mgsdkihhhhhhmdvfsdrvllteespirklvpfaemakkrgvrihhlnigqpdlktpev
fferiyenkpevvyyshsagiwelreafasyykrrqrvdvkpenvlvtnggseailfsfa
vianpgdeilvlepfyanynafakiagvklipvtrrmeegfaipqnlesfinertkgivl
snpcnptgvvygkdemrylveiaerhglflivdevyseivfrgefasalsiesdkvvvid
svskkfsacgarvgclitrneelishamklaqgrlapplleqigsvgllnlddsffdfvr
etyrervetvlkkleehglkrftkpsgafyitaelpvedaeefarwmltdfnmdgettmv
aplrgfyltpglgkkeiriacvlekdllsraidvlmeglkmfcssrisc

    Sequence, based on observed residues (ATOM records): (download) 
    >2gb3B (B:)
hhmdvfsdrvllteespirklvpfaemakkrgvrihhlnigqpdlktpevfferiyenkp
evvyyshsagiwelreafasyykrrqrvdvkpenvlvtnggseailfsfavianpgdeil
vlepfyanynafakiagvklipvtrrmeegfaipqnlesfinertkgivlsnpcnptgvv
ygkdemrylveiaerhglflivdevyseivfrgefasalsiesdkvvvidsvskkfsacg
arvgclitrneelishamklaqgrlapplleqigsvgllnlddsffdfvretyrervetv
lkkleehglkrftkpsgafyitaelpvedaeefarwmltdfnmdgettmvaplrgfyltp
glgkkeiriacvlekdllsraidvlmeglkmfcs

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2gb3C (C:)
mgsdkihhhhhhmdvfsdrvllteespirklvpfaemakkrgvrihhlnigqpdlktpev
fferiyenkpevvyyshsagiwelreafasyykrrqrvdvkpenvlvtnggseailfsfa
vianpgdeilvlepfyanynafakiagvklipvtrrmeegfaipqnlesfinertkgivl
snpcnptgvvygkdemrylveiaerhglflivdevyseivfrgefasalsiesdkvvvid
svskkfsacgarvgclitrneelishamklaqgrlapplleqigsvgllnlddsffdfvr
etyrervetvlkkleehglkrftkpsgafyitaelpvedaeefarwmltdfnmdgettmv
aplrgfyltpglgkkeiriacvlekdllsraidvlmeglkmfcssrisc

    Sequence, based on observed residues (ATOM records): (download) 
    >2gb3C (C:)
dvfsdrvllteespirklvpfaemakkrgvrihhlnigqpdlktpevfferiyenkpevv
yyshsagiwelreafasyykrrqrvdvkpenvlvtnggseailfsfavianpgdeilvle
pfyanynafakiagvklipvtrrmeegfaipqnlesfinertkgivlsnpcnptgvvygk
demrylveiaerhglflivdevyseivfrgefasalsiesdkvvvidsvskkfsacgarv
gclitrneelishamklaqgrlapplleqigsvgllnlddsffdfvretyrervetvlkk
leehglkrftkpsgafyitaelpvedaeefarwmltdfnmdgettmvaplrgfyltpglg
kkeiriacvlekdllsraidvlmeglkmfcs

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2gb3D (D:)
mgsdkihhhhhhmdvfsdrvllteespirklvpfaemakkrgvrihhlnigqpdlktpev
fferiyenkpevvyyshsagiwelreafasyykrrqrvdvkpenvlvtnggseailfsfa
vianpgdeilvlepfyanynafakiagvklipvtrrmeegfaipqnlesfinertkgivl
snpcnptgvvygkdemrylveiaerhglflivdevyseivfrgefasalsiesdkvvvid
svskkfsacgarvgclitrneelishamklaqgrlapplleqigsvgllnlddsffdfvr
etyrervetvlkkleehglkrftkpsgafyitaelpvedaeefarwmltdfnmdgettmv
aplrgfyltpglgkkeiriacvlekdllsraidvlmeglkmfcssrisc

    Sequence, based on observed residues (ATOM records): (download) 
    >2gb3D (D:)
mdvfsdrvllteespirklvpfaemakkrgvrihhlnigqpdlktpevfferiyenkpev
vyyshsagiwelreafasyykrrqrvdvkpenvlvtnggseailfsfavianpgdeilvl
epfyanynafakiagvklipvtrrmeegfaipqnlesfinertkgivlsnpcnptgvvyg
kdemrylveiaerhglflivdevyseivfrgefasalsiesdkvvvidsvskkfsacgar
vgclitrneelishamklaqgrlapplleqigsvgllnlddsffdfvretyrervetvlk
kleehglkrftkpsgafyitaelpvedaeefarwmltdfnmdgettmvaplrgfyltpgl
gkkeiriacvlekdllsraidvlmeglkmf

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2gb3E (E:)
mgsdkihhhhhhmdvfsdrvllteespirklvpfaemakkrgvrihhlnigqpdlktpev
fferiyenkpevvyyshsagiwelreafasyykrrqrvdvkpenvlvtnggseailfsfa
vianpgdeilvlepfyanynafakiagvklipvtrrmeegfaipqnlesfinertkgivl
snpcnptgvvygkdemrylveiaerhglflivdevyseivfrgefasalsiesdkvvvid
svskkfsacgarvgclitrneelishamklaqgrlapplleqigsvgllnlddsffdfvr
etyrervetvlkkleehglkrftkpsgafyitaelpvedaeefarwmltdfnmdgettmv
aplrgfyltpglgkkeiriacvlekdllsraidvlmeglkmfcssrisc

    Sequence, based on observed residues (ATOM records): (download) 
    >2gb3E (E:)
hhmdvfsdrvllteespirklvpfaemakkrgvrihhlnigqpdlktpevfferiyenkp
evvyyshsagiwelreafasyykrrqrvdvkpenvlvtnggseailfsfavianpgdeil
vlepfyanynafakiagvklipvtrrmeegfaipqnlesfinertkgivlsnpcnptgvv
ygkdemrylveiaerhglflivdevyseivfrgefasalsiesdkvvvidsvskkfsacg
arvgclitrneelishamklaqgrlapplleqigsvgllnlddsffdfvretyrervetv
lkkleehglkrftkpsgafyitaelpvedaeefarwmltdfnmdgettmvaplrgfyltp
glgkkeiriacvlekdllsraidvlmeglkmfc

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2gb3F (F:)
mgsdkihhhhhhmdvfsdrvllteespirklvpfaemakkrgvrihhlnigqpdlktpev
fferiyenkpevvyyshsagiwelreafasyykrrqrvdvkpenvlvtnggseailfsfa
vianpgdeilvlepfyanynafakiagvklipvtrrmeegfaipqnlesfinertkgivl
snpcnptgvvygkdemrylveiaerhglflivdevyseivfrgefasalsiesdkvvvid
svskkfsacgarvgclitrneelishamklaqgrlapplleqigsvgllnlddsffdfvr
etyrervetvlkkleehglkrftkpsgafyitaelpvedaeefarwmltdfnmdgettmv
aplrgfyltpglgkkeiriacvlekdllsraidvlmeglkmfcssrisc

    Sequence, based on observed residues (ATOM records): (download) 
    >2gb3F (F:)
vfsdrvllteespirklvpfaemakkrgvrihhlnigqpdlktpevfferiyenkpevvy
yshsagiwelreafasyykrrqrvdvkpenvlvtnggseailfsfavianpgdeilvlep
fyanynafakiagvklipvtrrmeegfaipqnlesfinertkgivlsnpcnptgvvygkd
emrylveiaerhglflivdevyseivfrgefasalsiesdkvvvidsvskkfsacgarvg
clitrneelishamklaqgrlapplleqigsvgllnlddsffdfvretyrervetvlkkl
eehglkrftkpsgafyitaelpvedaeefarwmltdfnmdgettmvaplrgfyltpglgk
keiriacvlekdllsraidvlmeglkmfc