PDB entry 2g7m

View 2g7m on RCSB PDB site
Description: Crystal structure of B. fragilis N-succinylornithine transcarbamylase P90E mutant complexed with carbamoyl phosphate and N-acetylnorvaline
Class: transferase
Keywords: Alpha/beta, TRANSFERASE
Deposited on 2006-02-28, released 2007-03-06
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-18, with a file datestamp of 2017-10-13.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'C':
    Compound: putative ornithine carbamoyltransferase
    Species: Bacteroides fragilis [TaxId:817]
    Gene: argF'
    Database cross-references and differences (RAF-indexed):
    • GB CAH06201 (20-337)
      • cloning artifact (18-19)
      • engineered (109)
      • engineered (261)
    Domains in SCOPe 2.07: d2g7mc1, d2g7mc2, d2g7mc3
  • Chain 'D':
    Compound: putative ornithine carbamoyltransferase
    Species: Bacteroides fragilis [TaxId:817]
    Gene: argF'
    Database cross-references and differences (RAF-indexed):
    • GB CAH06201 (20-337)
      • cloning artifact (18-19)
      • engineered (109)
      • engineered (261)
    Domains in SCOPe 2.07: d2g7md1, d2g7md2, d2g7md3
  • Chain 'E':
    Compound: putative ornithine carbamoyltransferase
    Species: Bacteroides fragilis [TaxId:817]
    Gene: argF'
    Database cross-references and differences (RAF-indexed):
    • GB CAH06201 (20-337)
      • cloning artifact (18-19)
      • engineered (109)
      • engineered (261)
    Domains in SCOPe 2.07: d2g7me1, d2g7me2, d2g7me3
  • Chain 'X':
    Compound: putative ornithine carbamoyltransferase
    Species: Bacteroides fragilis [TaxId:817]
    Gene: argF'
    Database cross-references and differences (RAF-indexed):
    • GB CAH06201 (20-337)
      • cloning artifact (17-19)
      • engineered (109)
      • engineered (261)
    Domains in SCOPe 2.07: d2g7mx1, d2g7mx2, d2g7mx3
  • Chain 'Y':
    Compound: putative ornithine carbamoyltransferase
    Species: Bacteroides fragilis [TaxId:817]
    Gene: argF'
    Database cross-references and differences (RAF-indexed):
    • GB CAH06201 (20-337)
      • cloning artifact (17-19)
      • engineered (109)
      • engineered (261)
    Domains in SCOPe 2.07: d2g7my1, d2g7my2, d2g7my3
  • Chain 'Z':
    Compound: putative ornithine carbamoyltransferase
    Species: Bacteroides fragilis [TaxId:817]
    Gene: argF'
    Database cross-references and differences (RAF-indexed):
    • GB CAH06201 (20-337)
      • cloning artifact (18-19)
      • engineered (109)
      • engineered (261)
    Domains in SCOPe 2.07: d2g7mz1, d2g7mz2, d2g7mz3
  • Heterogens: AN0, CP, SO4, HOH

PDB Chain Sequences:

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2g7mC (C:)
    mgsshhhhhhssglvprgshmkkftcvqdigdlksalaesfeikkdrfkyvelgrnktll
    miffnsslrtrlstqkaalnlgmnvivldinqgawkletergvimdgdkeehlleaipvm
    gcycdiigvrsfarfenreydyneviinqfiqhsgrpvfsmeaatrhplqsfadlitiee
    ykktarpkvvmtwaphprplpqavpnsfaewmnatdyefvithpegyeldpkfvgnarve
    ydqmkafegadfiyaknwaaylgdnygqilstdrnwtvgdrqmavtnnayfmhclpvrrn
    mivtddviespqsivipeaanreisatvvlkrllenlp
    

    Sequence, based on observed residues (ATOM records): (download)
    >2g7mC (C:)
    shmkkftcvqdigdlksalaesfeikkdrfkyvelgrnktllmiffnsslrtrlstqkaa
    lnlgmnvivldinqgawkletergvimdgdkeehlleaipvmgcycdiigvrsfarfenr
    eydyneviinqfiqhsgrpvfsmeaatrhplqsfadlitieeykktarpkvvmtwaphpr
    plpqavpnsfaewmnatdyefvithpegyeldpkfvgnarveydqmkafegadfiyaknw
    aaylgdnygqilstdrnwtvgdrqmavtnnayfmhclpvrrnmivtddviespqsivipe
    aanreisatvvlkrllenlp
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >2g7mD (D:)
    mgsshhhhhhssglvprgshmkkftcvqdigdlksalaesfeikkdrfkyvelgrnktll
    miffnsslrtrlstqkaalnlgmnvivldinqgawkletergvimdgdkeehlleaipvm
    gcycdiigvrsfarfenreydyneviinqfiqhsgrpvfsmeaatrhplqsfadlitiee
    ykktarpkvvmtwaphprplpqavpnsfaewmnatdyefvithpegyeldpkfvgnarve
    ydqmkafegadfiyaknwaaylgdnygqilstdrnwtvgdrqmavtnnayfmhclpvrrn
    mivtddviespqsivipeaanreisatvvlkrllenlp
    

    Sequence, based on observed residues (ATOM records): (download)
    >2g7mD (D:)
    shmkkftcvqdigdlksalaesfeikkdrfkyvelgrnktllmiffnsslrtrlstqkaa
    lnlgmnvivldinqgawkletergvimdgdkeehlleaipvmgcycdiigvrsfarfenr
    eydyneviinqfiqhsgrpvfsmeaatrhplqsfadlitieeykktarpkvvmtwaphpr
    plpqavpnsfaewmnatdyefvithpegyeldpkfvgnarveydqmkafegadfiyaknw
    aaylgdnygqilstdrnwtvgdrqmavtnnayfmhclpvrrnmivtddviespqsivipe
    aanreisatvvlkrllenlp
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >2g7mE (E:)
    mgsshhhhhhssglvprgshmkkftcvqdigdlksalaesfeikkdrfkyvelgrnktll
    miffnsslrtrlstqkaalnlgmnvivldinqgawkletergvimdgdkeehlleaipvm
    gcycdiigvrsfarfenreydyneviinqfiqhsgrpvfsmeaatrhplqsfadlitiee
    ykktarpkvvmtwaphprplpqavpnsfaewmnatdyefvithpegyeldpkfvgnarve
    ydqmkafegadfiyaknwaaylgdnygqilstdrnwtvgdrqmavtnnayfmhclpvrrn
    mivtddviespqsivipeaanreisatvvlkrllenlp
    

    Sequence, based on observed residues (ATOM records): (download)
    >2g7mE (E:)
    shmkkftcvqdigdlksalaesfeikkdrfkyvelgrnktllmiffnsslrtrlstqkaa
    lnlgmnvivldinqgawkletergvimdgdkeehlleaipvmgcycdiigvrsfarfenr
    eydyneviinqfiqhsgrpvfsmeaatrhplqsfadlitieeykktarpkvvmtwaphpr
    plpqavpnsfaewmnatdyefvithpegyeldpkfvgnarveydqmkafegadfiyaknw
    aaylgdnygqilstdrnwtvgdrqmavtnnayfmhclpvrrnmivtddviespqsivipe
    aanreisatvvlkrllenlp
    

  • Chain 'X':
    Sequence, based on SEQRES records: (download)
    >2g7mX (X:)
    mgsshhhhhhssglvprgshmkkftcvqdigdlksalaesfeikkdrfkyvelgrnktll
    miffnsslrtrlstqkaalnlgmnvivldinqgawkletergvimdgdkeehlleaipvm
    gcycdiigvrsfarfenreydyneviinqfiqhsgrpvfsmeaatrhplqsfadlitiee
    ykktarpkvvmtwaphprplpqavpnsfaewmnatdyefvithpegyeldpkfvgnarve
    ydqmkafegadfiyaknwaaylgdnygqilstdrnwtvgdrqmavtnnayfmhclpvrrn
    mivtddviespqsivipeaanreisatvvlkrllenlp
    

    Sequence, based on observed residues (ATOM records): (download)
    >2g7mX (X:)
    gshmkkftcvqdigdlksalaesfeikkdrfkyvelgrnktllmiffnsslrtrlstqka
    alnlgmnvivldinqgawkletergvimdgdkeehlleaipvmgcycdiigvrsfarfen
    reydyneviinqfiqhsgrpvfsmeaatrhplqsfadlitieeykktarpkvvmtwaphp
    rplpqavpnsfaewmnatdyefvithpegyeldpkfvgnarveydqmkafegadfiyakn
    waaylgdnygqilstdrnwtvgdrqmavtnnayfmhclpvrrnmivtddviespqsivip
    eaanreisatvvlkrllenlp
    

  • Chain 'Y':
    Sequence, based on SEQRES records: (download)
    >2g7mY (Y:)
    mgsshhhhhhssglvprgshmkkftcvqdigdlksalaesfeikkdrfkyvelgrnktll
    miffnsslrtrlstqkaalnlgmnvivldinqgawkletergvimdgdkeehlleaipvm
    gcycdiigvrsfarfenreydyneviinqfiqhsgrpvfsmeaatrhplqsfadlitiee
    ykktarpkvvmtwaphprplpqavpnsfaewmnatdyefvithpegyeldpkfvgnarve
    ydqmkafegadfiyaknwaaylgdnygqilstdrnwtvgdrqmavtnnayfmhclpvrrn
    mivtddviespqsivipeaanreisatvvlkrllenlp
    

    Sequence, based on observed residues (ATOM records): (download)
    >2g7mY (Y:)
    gshmkkftcvqdigdlksalaesfeikkdrfkyvelgrnktllmiffnsslrtrlstqka
    alnlgmnvivldinqgawkletergvimdgdkeehlleaipvmgcycdiigvrsfarfen
    reydyneviinqfiqhsgrpvfsmeaatrhplqsfadlitieeykktarpkvvmtwaphp
    rplpqavpnsfaewmnatdyefvithpegyeldpkfvgnarveydqmkafegadfiyakn
    waaylgdnygqilstdrnwtvgdrqmavtnnayfmhclpvrrnmivtddviespqsivip
    eaanreisatvvlkrllenlp
    

  • Chain 'Z':
    Sequence, based on SEQRES records: (download)
    >2g7mZ (Z:)
    mgsshhhhhhssglvprgshmkkftcvqdigdlksalaesfeikkdrfkyvelgrnktll
    miffnsslrtrlstqkaalnlgmnvivldinqgawkletergvimdgdkeehlleaipvm
    gcycdiigvrsfarfenreydyneviinqfiqhsgrpvfsmeaatrhplqsfadlitiee
    ykktarpkvvmtwaphprplpqavpnsfaewmnatdyefvithpegyeldpkfvgnarve
    ydqmkafegadfiyaknwaaylgdnygqilstdrnwtvgdrqmavtnnayfmhclpvrrn
    mivtddviespqsivipeaanreisatvvlkrllenlp
    

    Sequence, based on observed residues (ATOM records): (download)
    >2g7mZ (Z:)
    shmkkftcvqdigdlksalaesfeikkdrfkyvelgrnktllmiffnsslrtrlstqkaa
    lnlgmnvivldinqgawkletergvimdgdkeehlleaipvmgcycdiigvrsfarfenr
    eydyneviinqfiqhsgrpvfsmeaatrhplqsfadlitieeykktarpkvvmtwaphpr
    plpqavpnsfaewmnatdyefvithpegyeldpkfvgnarveydqmkafegadfiyaknw
    aaylgdnygqilstdrnwtvgdrqmavtnnayfmhclpvrrnmivtddviespqsivipe
    aanreisatvvlkrllenlp