PDB entry 2fli

View 2fli on RCSB PDB site
Description: The crystal structure of D-ribulose 5-phosphate 3-epimerase from Streptococus pyogenes complexed with D-xylitol 5-phosphate
Class: isomerase
Keywords: D-ribulose 5-phosphate 3-epimerase, (beta/alpha)8-barrel, D-xylitol 5-phosphate, ISOMERASE
Deposited on 2006-01-06, released 2006-03-07
The last revision prior to the SCOPe 2.02 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.224
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ribulose-phosphate 3-epimerase
    Species: Streptococcus pyogenes [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d2flia1
  • Chain 'B':
    Compound: ribulose-phosphate 3-epimerase
    Species: Streptococcus pyogenes [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d2flib_
  • Chain 'C':
    Compound: ribulose-phosphate 3-epimerase
    Species: Streptococcus pyogenes [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d2flic_
  • Chain 'D':
    Compound: ribulose-phosphate 3-epimerase
    Species: Streptococcus pyogenes [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d2flid_
  • Chain 'E':
    Compound: ribulose-phosphate 3-epimerase
    Species: Streptococcus pyogenes [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d2flie_
  • Chain 'F':
    Compound: ribulose-phosphate 3-epimerase
    Species: Streptococcus pyogenes [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d2flif_
  • Chain 'G':
    Compound: ribulose-phosphate 3-epimerase
    Species: Streptococcus pyogenes [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d2flig_
  • Chain 'H':
    Compound: ribulose-phosphate 3-epimerase
    Species: Streptococcus pyogenes [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d2flih_
  • Chain 'I':
    Compound: ribulose-phosphate 3-epimerase
    Species: Streptococcus pyogenes [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d2flii_
  • Chain 'J':
    Compound: ribulose-phosphate 3-epimerase
    Species: Streptococcus pyogenes [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d2flij_
  • Chain 'K':
    Compound: ribulose-phosphate 3-epimerase
    Species: Streptococcus pyogenes [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d2flik_
  • Chain 'L':
    Compound: ribulose-phosphate 3-epimerase
    Species: Streptococcus pyogenes [TaxId:1314]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d2flil_
  • Heterogens: ZN, DX5, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2fliA (A:)
mstlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhs
klvfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgt
pataleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvd
nktiracyeaganvfvagsylfkasdlvsqvqtlrtalnv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fliA (A:)
tlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhskl
vfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgtpa
taleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvdnk
tiracyeaganvfvagsylfkasdlvsqvqtlrtaln

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2fliB (B:)
mstlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhs
klvfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgt
pataleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvd
nktiracyeaganvfvagsylfkasdlvsqvqtlrtalnv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fliB (B:)
stlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhsk
lvfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgtp
ataleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvdn
ktiracyeaganvfvagsylfkasdlvsqvqtlrtal

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2fliC (C:)
mstlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhs
klvfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgt
pataleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvd
nktiracyeaganvfvagsylfkasdlvsqvqtlrtalnv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fliC (C:)
stlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhsk
lvfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgtp
ataleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvdn
ktiracyeaganvfvagsylfkasdlvsqvqtlrtalnv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2fliD (D:)
mstlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhs
klvfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgt
pataleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvd
nktiracyeaganvfvagsylfkasdlvsqvqtlrtalnv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fliD (D:)
stlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhsk
lvfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgtp
ataleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvdn
ktiracyeaganvfvagsylfkasdlvsqvqtlrtal

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2fliE (E:)
mstlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhs
klvfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgt
pataleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvd
nktiracyeaganvfvagsylfkasdlvsqvqtlrtalnv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fliE (E:)
tlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhskl
vfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgtpa
taleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvdnk
tiracyeaganvfvagsylfkasdlvsqvqtlrtal

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2fliF (F:)
mstlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhs
klvfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgt
pataleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvd
nktiracyeaganvfvagsylfkasdlvsqvqtlrtalnv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fliF (F:)
tlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhskl
vfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgtpa
taleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvdnk
tiracyeaganvfvagsylfkasdlvsqvqtlrtal

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >2fliG (G:)
mstlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhs
klvfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgt
pataleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvd
nktiracyeaganvfvagsylfkasdlvsqvqtlrtalnv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fliG (G:)
stlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhsk
lvfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgtp
ataleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvdn
ktiracyeaganvfvagsylfkasdlvsqvqtlrtaln

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2fliH (H:)
mstlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhs
klvfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgt
pataleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvd
nktiracyeaganvfvagsylfkasdlvsqvqtlrtalnv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fliH (H:)
tlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhskl
vfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgtpa
taleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvdnk
tiracyeaganvfvagsylfkasdlvsqvqtlrtal

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >2fliI (I:)
mstlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhs
klvfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgt
pataleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvd
nktiracyeaganvfvagsylfkasdlvsqvqtlrtalnv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fliI (I:)
tlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhskl
vfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgtpa
taleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvdnk
tiracyeaganvfvagsylfkasdlvsqvqtlrtaln

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >2fliJ (J:)
mstlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhs
klvfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgt
pataleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvd
nktiracyeaganvfvagsylfkasdlvsqvqtlrtalnv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fliJ (J:)
stlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhsk
lvfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgtp
ataleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvdn
ktiracyeaganvfvagsylfkasdlvsqvqtlrtaln

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >2fliK (K:)
mstlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhs
klvfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgt
pataleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvd
nktiracyeaganvfvagsylfkasdlvsqvqtlrtalnv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fliK (K:)
tlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhskl
vfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgtpa
taleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvdnk
tiracyeaganvfvagsylfkasdlvsqvqtlrtal

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >2fliL (L:)
mstlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhs
klvfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgt
pataleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvd
nktiracyeaganvfvagsylfkasdlvsqvqtlrtalnv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fliL (L:)
tlkiapsilaadyanfaselarieetdaeyvhidimdgqfvpnisfgadvvasmrkhskl
vfdchlmvvdperyveafaqagadimtihtestrhihgalqkikaagmkagvvinpgtpa
taleplldlvdqvlimtvnpgfggqafipeclekvatvakwrdekglsfdievdggvdnk
tiracyeaganvfvagsylfkasdlvsqvqtlrtalnv