PDB entry 2ek3

View 2ek3 on RCSB PDB site
Description: Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L3M)
Class: Transferase
Keywords: Transferase, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI
Deposited on 2007-03-22, released 2007-09-25
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.19
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: diphthine synthase
    Species: Pyrococcus horikoshii [TaxId:70601]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O58456 (Start-264)
      • engineered (2)
    Domains in SCOPe 2.04: d2ek3a_
  • Chain 'B':
    Compound: diphthine synthase
    Species: Pyrococcus horikoshii [TaxId:70601]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O58456 (Start-264)
      • engineered (2)
    Domains in SCOPe 2.04: d2ek3b_
  • Heterogens: NA, SAH, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2ek3A (A:)
mvmyfiglglyderditvkgleiakkcdyvfaefytslmagttlgriqkligkeirvlsr
edvelnfenivlplakendvafltpgdplvatthaelrirakragvesyvihapsiysav
gitglhiykfgksatvaypegnwfptsyydvikenaerglhtllfldikaekrmymtane
amelllkvedmkkggvftddtlvvvlaragslnptiragyvkdliredfgdpphilivpg
klhiveaeylveiagapreilrvnv

    Sequence, based on observed residues (ATOM records): (download) 
    >2ek3A (A:)
vmyfiglglyderditvkgleiakkcdyvfaefytslmagttlgriqkligkeirvlsre
dvelnfenivlplakendvafltpgdplvatthaelrirakragvesyvihapsiysavg
itglhiykfgksatvaypegnwfptsyydvikenaerglhtllfldikaekrmymtanea
melllkvedmkkggvftddtlvvvlaragslnptiragyvkdliredfgdpphilivpgk
lhiveaeylveiagapreilrvnv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2ek3B (B:)
mvmyfiglglyderditvkgleiakkcdyvfaefytslmagttlgriqkligkeirvlsr
edvelnfenivlplakendvafltpgdplvatthaelrirakragvesyvihapsiysav
gitglhiykfgksatvaypegnwfptsyydvikenaerglhtllfldikaekrmymtane
amelllkvedmkkggvftddtlvvvlaragslnptiragyvkdliredfgdpphilivpg
klhiveaeylveiagapreilrvnv

    Sequence, based on observed residues (ATOM records): (download) 
    >2ek3B (B:)
vmyfiglglyderditvkgleiakkcdyvfaefytslmagttlgriqkligkeirvlsre
dvelnfenivlplakendvafltpgdplvatthaelrirakragvesyvihapsiysavg
itglhiykfgksatvaypegnwfptsyydvikenaerglhtllfldikaekrmymtanea
melllkvedmkkggvftddtlvvvlaragslnptiragyvkdliredfgdpphilivpgk
lhiveaeylveiagapreilrvnv