PDB entry 2dm5
View 2dm5 on RCSB PDB site
Description: Thermodynamic Penalty Arising From Burial of a Ligand Polar Group Within a Hydrophobic Pocket of a Protein Receptor
Class: transport protein
Keywords: beta barrel, lipocalin, transport protein
Deposited on
2006-04-20, released
2006-10-17
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.19
AEROSPACI score: 0.53
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: major urinary protein
Species: Mus musculus [TaxId:10090]
Gene: MUP1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2dm5a_ - Heterogens: CD, ODI, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2dm5A (A:)
mrgshhhhhhgseeasstgrnfnvekingewhtiilasdkrekiedngnfrlfleqihvl
ekslvlkfhtvrdeecselsmvadktekageysvtydgfntftipktdydnflmahline
kdgetfqlmglygrepdlssdikerfaqlceehgilreniidlsnanrclqare
Sequence, based on observed residues (ATOM records): (download)
>2dm5A (A:)
eeasstgrnfnvekingewhtiilasdkrekiedngnfrlfleqihvlekslvlkfhtvr
deecselsmvadktekageysvtydgfntftipktdydnflmahlinekdgetfqlmgly
grepdlssdikerfaqlceehgilreniidlsnanrc