PDB entry 2df4

View 2df4 on RCSB PDB site
Description: Structure of tRNA-Dependent Amidotransferase GatCAB complexed with Mn2+
Class: ligase
Keywords: multi protein complex, ligase
Deposited on 2006-02-23, released 2006-07-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 3.2 Å
R-factor: 0.238
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamyl-tRNA(Gln) amidotransferase subunit A
    Species: Staphylococcus aureus [TaxId:1280]
    Gene: gatA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2df4a1
  • Chain 'B':
    Compound: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
    Species: Staphylococcus aureus [TaxId:1280]
    Gene: gatB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2df4b1, d2df4b2
  • Chain 'C':
    Compound: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
    Species: Staphylococcus aureus [TaxId:1280]
    Gene: gatC
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2df4c1
  • Heterogens: MN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2df4A (A:)
msiryesvenlltlikdkkikpsdvvkdiydaieetdptiksflaldkenaikkaqelde
lqakdqmdgklfgipmgikdniitnglettcaskmlegfvpiyestvmeklhkenavlig
klnmdefamggstetsyfkktvnpfdhkavpggssggsaaavaaglvplslgsdtggsir
qpaaycgvvgmkptygrvsrfglvafassldqigpltrnvkdnaivleaisgadvndsts
apvddvdftseigkdikglkvalpkeylgegvaddvkeavqnavetlkslgavveevslp
ntkfgipsyyviasseassnlsrfdgirygyhskeahsleelykmsrsegfgkevkrrif
lgtfalssgyydayykksqkvrtlikndfdkvfenydvvvgptapttafnlgeeiddplt
myandllttpvnlaglpgisvpcgqsngrpiglqfigkpfdektlyrvayqyetqynlhd
vyekl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2df4B (B:)
mhfetviglevhvelktdskmfspspahfgaepnsntnvidlaypgvlpvvnkravdwam
raamalnmeiateskfdrknyfypdnpkayqisqfdqpigengyidievdgetkrigitr
lhmeedagksthkgeyslvdlnrqgtplieivsepdirspkeayayleklrsiiqytgvs
dvkmeegslrcdanislrpygqekfgtkaelknlnsfnyvrkgleyeekrqeeellngge
igqetrrfdestgktilmrvkegsddyryfpepdivplyiddawkervrqtipelpderk
akyvnelglpaydahvltltkemsdffestiehgadvkltsnwlmggvneylnknqvell
dtkltpenlagmikliedgtmsskiakkvfpelaakggnakqimednglvqisdeatllk
fvnealdnneqsvedykngkgkamgflvgqimkaskgqanpqlvnqllkqeldkrlehhh
hhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2df4B (B:)
hfetviglevhvelktdskmfspspahfgaepnsntnvidlaypgvlpvvnkravdwamr
aamalnmeiateskfdrknyfypdnpkayqisqfdqpigengyidievdgetkrigitrl
hmeedagksthkgeyslvdlnrqgtplieivsepdirspkeayayleklrsiiqytgvsd
vkmeegslrcdanislrpygqekfgtkaelknlnsfnyvrkgleyeekrqeeellnggei
gqetrrfdestgktilmrvkegsddyryfpepdivplyiddawkervrqtipelpderka
kyvnelglpaydahvltltkemsdffestiehgadvkltsnwlmggvneylnknqvelld
tkltpenlagmikliedgtmsskiakkvfpelaakggna

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2df4C (C:)
mtkvtreevehianlarlqispeeteemantlesildfakqndsadtegveptyhvldlq
nvlredkaikgipqelalknaketedgqfkvptimneeda

    Sequence, based on observed residues (ATOM records): (download) 
    >2df4C (C:)
tkvtreevehianlarlqispeeteemantlesildfakqndsadtegveptyhvldlqn
vlredkaikgipqelalknaketedgqfkvptimneeda