PDB entry 2ba1

View 2ba1 on RCSB PDB site
Description: Archaeal exosome core
Class: RNA binding protein
Keywords: exosome, RNAse ph, RNA degradation, exoribonuclease, RNA binding, s1 domain, zn-ribbon, archaeal, phosphorolytic, RNA binding protein
Deposited on 2005-10-13, released 2005-11-22
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.224
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Archaeal exosome RNA binding protein CSL4
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Archaeal exosome RNA binding protein CSL4
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Archaeal exosome RNA binding protein CSL4
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Archaeal exosome complex exonuclease RRP41
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2ba1d1, d2ba1d2
  • Chain 'E':
    Compound: Archaeal exosome complex exonuclease RRP41
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2ba1e1, d2ba1e2
  • Chain 'F':
    Compound: Archaeal exosome complex exonuclease RRP41
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2ba1f1, d2ba1f2
  • Chain 'G':
    Compound: Archaeal exosome complex exonuclease RRP42
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2ba1g1, d2ba1g2
  • Chain 'H':
    Compound: Archaeal exosome complex exonuclease RRP42
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2ba1h1, d2ba1h2
  • Chain 'I':
    Compound: Archaeal exosome complex exonuclease RRP42
    Species: Archaeoglobus fulgidus [TaxId:2234]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2ba1i1, d2ba1i2
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2ba1D (D:)
msefnekpeklivdglrldgrkfdelrpikieasvlkradgscylemgknkviaavfgpr
evhprhlqdpskaiiryrynmapfsveerkrpgpdrrsieiskvskeafeavimkelfpr
saidifvevlqadagsrtaclnaasvalvdagvpmkgmitsvavgkadgqlvldpmkeed
nfgeadmpfaflirngkiesiallqmdgrmtrdevkqaielakkgalqiyemqreailrr
yievgeemdeiteggeda

    Sequence, based on observed residues (ATOM records): (download) 
    >2ba1D (D:)
eklivdglrldgrkfdelrpikieasvlkradgscylemgknkviaavfgprevhprhlq
dpskaiiryrynmapfsveerkrpgpdrrsieiskvskeafeavimkelfprsaidifve
vlqadagsrtaclnaasvalvdagvpmkgmitsvavgkadgqlvldpmkeednfgeadmp
faflirngkiesiallqmdgrmtrdevkqaielakkgalqiyemqreailrryievgeem
deite

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2ba1E (E:)
msefnekpeklivdglrldgrkfdelrpikieasvlkradgscylemgknkviaavfgpr
evhprhlqdpskaiiryrynmapfsveerkrpgpdrrsieiskvskeafeavimkelfpr
saidifvevlqadagsrtaclnaasvalvdagvpmkgmitsvavgkadgqlvldpmkeed
nfgeadmpfaflirngkiesiallqmdgrmtrdevkqaielakkgalqiyemqreailrr
yievgeemdeiteggeda

    Sequence, based on observed residues (ATOM records): (download) 
    >2ba1E (E:)
eklivdglrldgrkfdelrpikieasvlkradgscylemgknkviaavfgprevhprhlq
dpskaiiryrynmapfsveerkrpgpdrrsieiskvskeafeavimkelfprsaidifve
vlqadagsrtaclnaasvalvdagvpmkgmitsvavgkadgqlvldpmkeednfgeadmp
faflirngkiesiallqmdgrmtrdevkqaielakkgalqiyemqreailrryievgeem
deite

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2ba1F (F:)
msefnekpeklivdglrldgrkfdelrpikieasvlkradgscylemgknkviaavfgpr
evhprhlqdpskaiiryrynmapfsveerkrpgpdrrsieiskvskeafeavimkelfpr
saidifvevlqadagsrtaclnaasvalvdagvpmkgmitsvavgkadgqlvldpmkeed
nfgeadmpfaflirngkiesiallqmdgrmtrdevkqaielakkgalqiyemqreailrr
yievgeemdeiteggeda

    Sequence, based on observed residues (ATOM records): (download) 
    >2ba1F (F:)
eklivdglrldgrkfdelrpikieasvlkradgscylemgknkviaavfgprevhprhlq
dpskaiiryrynmapfsveerkrpgpdrrsieiskvskeafeavimkelfprsaidifve
vlqadagsrtaclnaasvalvdagvpmkgmitsvavgkadgqlvldpmkeednfgeadmp
faflirngkiesiallqmdgrmtrdevkqaielakkgalqiyemqreailrryievgeem
deite

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >2ba1G (G:)
mpedilvdikrdyvlsklrdneridgrgfdefrkveiipnviekaegsalvklgdtqvvv
gvkmqpgepypdtpdrgviivnaelvplasptfepgppdensielarvvdrgireseavd
lsklvieegekvwivfvdihaldddgnlldasalaaiaalmntkvpaerfdlgedyllpv
rdlpvsvtslivgnkylvdpsreemsvgdttltittdkddnvvamqksggylldeklfde
lldvsincarklrekfkei

    Sequence, based on observed residues (ATOM records): (download) 
    >2ba1G (G:)
mpedilvdikrdyvlsklrdneridgrgfdefrkveiipnviekaegsalvklgdtqvvv
gvkmqpgepypdtpdrgviivnaelvpdensielarvvdrgireseavdlsklvieegek
vwivfvdihaldddgnlldasalaaiaalmntkvpaerfdlgedyllpvrdlpvsvtsli
vgnkylvdpsreemsvgdttltittdkddnvvamqksggylldeklfdelldvsincark
lrekfke

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2ba1H (H:)
mpedilvdikrdyvlsklrdneridgrgfdefrkveiipnviekaegsalvklgdtqvvv
gvkmqpgepypdtpdrgviivnaelvplasptfepgppdensielarvvdrgireseavd
lsklvieegekvwivfvdihaldddgnlldasalaaiaalmntkvpaerfdlgedyllpv
rdlpvsvtslivgnkylvdpsreemsvgdttltittdkddnvvamqksggylldeklfde
lldvsincarklrekfkei

    Sequence, based on observed residues (ATOM records): (download) 
    >2ba1H (H:)
mpedilvdikrdyvlsklrdneridgrgfdefrkveiipnviekaegsalvklgdtqvvv
gvkmqpgepypdtpdrgviivnaelvpdensielarvvdrgireseavdlsklvieegek
vwivfvdihaldddgnlldasalaaiaalmntkvpaerfdlgedyllpvrdlpvsvtsli
vgnkylvdpsreemsvgdttltittdkddnvvamqksggylldeklfdelldvsincark
lrekfke

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >2ba1I (I:)
mpedilvdikrdyvlsklrdneridgrgfdefrkveiipnviekaegsalvklgdtqvvv
gvkmqpgepypdtpdrgviivnaelvplasptfepgppdensielarvvdrgireseavd
lsklvieegekvwivfvdihaldddgnlldasalaaiaalmntkvpaerfdlgedyllpv
rdlpvsvtslivgnkylvdpsreemsvgdttltittdkddnvvamqksggylldeklfde
lldvsincarklrekfkei

    Sequence, based on observed residues (ATOM records): (download) 
    >2ba1I (I:)
mpedilvdikrdyvlsklrdneridgrgfdefrkveiipnviekaegsalvklgdtqvvv
gvkmqpgepypdtpdrgviivnaelvpdensielarvvdrgireseavdlsklvieegek
vwivfvdihaldddgnlldasalaaiaalmntkvpaerfdlgedyllpvrdlpvsvtsli
vgnkylvdpsreemsvgdttltittdkddnvvamqksggylldeklfdelldvsincark
lrekfke