PDB entry 1zyp

View 1zyp on RCSB PDB site
Description: Synchrotron reduced form of the N-terminal domain of Salmonella typhimurium AhpF
Class: oxidoreductase
Keywords: thioredoxin, disulfide, peroxiredoxin, thiolate, alkyl hydroperoxide reductase, synchrotron radiation, pKa, radiation damage, OXIDOREDUCTASE
Deposited on 2005-06-10, released 2005-06-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.205
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Alkyl hydroperoxide reductase subunit F
    Species: Salmonella typhimurium [TaxId:602]
    Gene: ahpF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zypa1, d1zypa2
  • Chain 'B':
    Compound: Alkyl hydroperoxide reductase subunit F
    Species: Salmonella typhimurium [TaxId:602]
    Gene: ahpF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zypb1, d1zypb2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1zypA (A:)
mldtnmktqlraylekltkpveliatlddsaksaeikellaeiaelsdkvtfkedntlpv
rkpsflitnpgsqqgprfagsplgheftslvlallwtgghpskeaqslleqirdidgdfe
fetyyslschncpdvvqalnlmavlnprikhtaidggtfqneiternvmgvpavfvngke
fgqgrmtlteivakvdtgaekr

    Sequence, based on observed residues (ATOM records): (download) 
    >1zypA (A:)
mldtnmktqlraylekltkpveliatlddsaksaeikellaeiaelsdkvtfkedntlpv
rkpsflitnpgsqqgprfagsplgheftslvlallwtgghpskeaqslleqirdidgdfe
fetyyslschncpdvvqalnlmavlnprikhtaidggtfqneiternvmgvpavfvngke
fgqgrmtlteivakvd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1zypB (B:)
mldtnmktqlraylekltkpveliatlddsaksaeikellaeiaelsdkvtfkedntlpv
rkpsflitnpgsqqgprfagsplgheftslvlallwtgghpskeaqslleqirdidgdfe
fetyyslschncpdvvqalnlmavlnprikhtaidggtfqneiternvmgvpavfvngke
fgqgrmtlteivakvdtgaekr

    Sequence, based on observed residues (ATOM records): (download) 
    >1zypB (B:)
mldtnmktqlraylekltkpveliatlddsaksaeikellaeiaelsdkvtfkedntlpv
rkpsflitnpgsqqgprfagsplgheftslvlallwtgghpskeaqslleqirdidgdfe
fetyyslschncpdvvqalnlmavlnprikhtaidggtfqneiternvmgvpavfvngke
fgqgrmtlteivakvd