PDB entry 1yzh
View 1yzh on RCSB PDB site
Description: Crystal Structure of the Conserved Hypothetical Protein, Methyltransferase from Streptococcus pneumoniae TIGR4
Class: transferase
Keywords: methyltransferase, alpha-beta-alpha sandwich, S-adenosylmethionine-dependent, Structural Genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG
Deposited on
2005-02-28, released
2005-04-12
The last revision prior to the SCOP 1.73 freeze date was dated
2005-04-12, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 2.02 Å
R-factor: 0.181
AEROSPACI score: 0.45
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: tRNA (guanine-N(7)-)-methyltransferase
Species: Streptococcus pneumoniae
Gene: trmB, SP0550
Database cross-references and differences (RAF-indexed):
- Uniprot P67506 (Start-213)
- modified residue (58)
- modified residue (173)
- modified residue (192)
Domains in SCOP 1.73: d1yzha1 - Chain 'B':
Compound: tRNA (guanine-N(7)-)-methyltransferase
Species: Streptococcus pneumoniae
Gene: trmB, SP0550
Database cross-references and differences (RAF-indexed):
- Uniprot P67506 (Start-213)
- modified residue (58)
- modified residue (173)
- modified residue (192)
Domains in SCOP 1.73: d1yzhb1 - Heterogens: GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1yzhA (A:)
snamrvrnrkgatelleanpqyvvlnpleakakwrdlfgndnpihvevgsgkgafvsgma
kqnpdinyigidiqksvlsyaldkvlevgvpnikllwvdgsdltdyfedgeidrlylnfs
dpwpkkrhekrrltyktfldtfkrilpengeihfktdnrglfeyslvsfsqygmklngvw
ldlhasdfegnvmteyeqkfsnkgqviyrveaef
Sequence, based on observed residues (ATOM records): (download)
>1yzhA (A:)
gatelleanpqyvvlnpleakakwrdlfgndnpihvevgsgkgafvsgmakqnpdinyig
idiqksvlsyaldkvlevgvpnikllwvdgsdltdyfedgeidrlylnfsdpwpkkrhek
rrltyktfldtfkrilpengeihfktdnrglfeyslvsfsqygmklngvwldlhasdfeg
nvmteyeqkfsnkgqviyrveaef
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1yzhB (B:)
snamrvrnrkgatelleanpqyvvlnpleakakwrdlfgndnpihvevgsgkgafvsgma
kqnpdinyigidiqksvlsyaldkvlevgvpnikllwvdgsdltdyfedgeidrlylnfs
dpwpkkrhekrrltyktfldtfkrilpengeihfktdnrglfeyslvsfsqygmklngvw
ldlhasdfegnvmteyeqkfsnkgqviyrveaef
Sequence, based on observed residues (ATOM records): (download)
>1yzhB (B:)
rkgatelleanpqyvvlnpleakakwrdlfgndnpihvevgsgkgafvsgmakqnpdiny
igidiqksvlsyaldkvlevgvpnikllwvdgsdltdyfedgeidrlylnfsdpwpkkrh
ekrrltyktfldtfkrilpengeihfktdnrglfeyslvsfsqygmklngvwldlhasdf
egnvmteyeqkfsnkgqviyrveaef