PDB entry 1yj1
View 1yj1 on RCSB PDB site
Description: X-ray Crystal Structure of a Chemically Synthesized [D-Gln35]Ubiquitin
Class: structural protein
Keywords: Ubiquitin, STRUCTURAL PROTEIN
Deposited on
2005-01-13, released
2005-06-14
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 1.3 Å
R-factor: 0.196
AEROSPACI score: 0.74
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ubiquitin
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- GB AAH14880 (0-End)
- engineered (0)
- modified residue (34)
Domains in SCOPe 2.08: d1yj1a1, d1yj1a2 - Chain 'B':
Compound: Ubiquitin
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- GB AAH14880 (0-End)
- engineered (0)
- modified residue (34)
Domains in SCOPe 2.08: d1yj1b1, d1yj1b2 - Chain 'C':
Compound: Ubiquitin
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- GB AAH14880 (0-End)
- engineered (0)
- modified residue (34)
Domains in SCOPe 2.08: d1yj1c1, d1yj1c2 - Heterogens: CD, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1yj1A (A:)
lqifvktltgktitlevepsdtienvkakiqdkeqippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>1yj1A (A:)
lqifvktltgktitlevepsdtienvkakiqdkeqippdqqrlifagkqledgrtlsdyn
iqkestlhlvl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1yj1B (B:)
lqifvktltgktitlevepsdtienvkakiqdkeqippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>1yj1B (B:)
lqifvktltgktitlevepsdtienvkakiqdkeqippdqqrlifagkqledgrtlsdyn
iqkestlhlvlr
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1yj1C (C:)
lqifvktltgktitlevepsdtienvkakiqdkeqippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>1yj1C (C:)
lqifvktltgktitlevepsdtienvkakiqdkeqippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlr