PDB entry 1yf9
View 1yf9 on RCSB PDB site
Description: Structural analysis of Leishmania major ubiquitin conjugating enzyme E2
Class: structural genomics, unknown function
Keywords: SGPP, Structural Genomics, PSI, Protein Structure Initiative, ubiquitin conjugating enzyme, Structural Genomics of Pathogenic Protozoa Consortium, UNKNOWN FUNCTION
Deposited on
2004-12-31, released
2005-02-22
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.186
AEROSPACI score: 0.46
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ubiquitin carrier protein 4
Species: Leishmania major [TaxId:5664]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yf9a1 - Chain 'B':
Compound: Ubiquitin carrier protein 4
Species: Leishmania major [TaxId:5664]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yf9b_ - Chain 'C':
Compound: Ubiquitin carrier protein 4
Species: Leishmania major [TaxId:5664]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yf9c_ - Heterogens: CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1yf9A (A:)
gpgsmsgagnlrsnrrremdymrlcnstrkvypsdtvaefwvefkgpegtpyedgtwmlh
vqlpsdypfkspsigfcnrilhpnvdersgsvcldvinqtwtpmyqlenifdvflpqllr
ypnpsdplnvqaahllhadrvgfdallrehvsthatpqkalesipeayrph
Sequence, based on observed residues (ATOM records): (download)
>1yf9A (A:)
snrrremdymrlcnstrkvypsdtvaefwvefkgpegtpyedgtwmlhvqlpsdypfksp
sigfcnrilhpnvdersgsvcldvinqtwtpmyqlenifdvflpqllrypnpsdplnvqa
ahllhadrvgfdallrehvsthatpqkalesipeayrp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1yf9B (B:)
gpgsmsgagnlrsnrrremdymrlcnstrkvypsdtvaefwvefkgpegtpyedgtwmlh
vqlpsdypfkspsigfcnrilhpnvdersgsvcldvinqtwtpmyqlenifdvflpqllr
ypnpsdplnvqaahllhadrvgfdallrehvsthatpqkalesipeayrph
Sequence, based on observed residues (ATOM records): (download)
>1yf9B (B:)
lrsnrrremdymrlcnstrkvypsdtvaefwvefkgpegtpyedgtwmlhvqlpsdypfk
spsigfcnrilhpnvdersgsvcldvinqtwtpmyqlenifdvflpqllrypnpsdplnv
qaahllhadrvgfdallrehvsthatpqkalesipeayrp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1yf9C (C:)
gpgsmsgagnlrsnrrremdymrlcnstrkvypsdtvaefwvefkgpegtpyedgtwmlh
vqlpsdypfkspsigfcnrilhpnvdersgsvcldvinqtwtpmyqlenifdvflpqllr
ypnpsdplnvqaahllhadrvgfdallrehvsthatpqkalesipeayrph
Sequence, based on observed residues (ATOM records): (download)
>1yf9C (C:)
snrrremdymrlcnstrkvypsdtvaefwvefkgpegtpyedgtwmlhvqlpsdypfksp
sigfcnrilhpnvdersgsvcldvinqtwtpmyqlenifdvflpqllrypnpsdplnvqa
ahllhadrvgfdallrehvsthatpqkalesipeayrph