PDB entry 1yf5

View 1yf5 on RCSB PDB site
Description: Cyto-Epsl: The Cytoplasmic Domain Of Epsl, An Inner Membrane Component Of The Type II Secretion System Of Vibrio Cholerae
Class: transport protein
Keywords: Type II secretion, secretory protein, TRANSPORT PROTEIN
Deposited on 2004-12-30, released 2005-05-03
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.75 Å
R-factor: 0.216
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'L':
    Compound: general secretion pathway protein l
    Species: Vibrio cholerae [TaxId:666]
    Gene: epsL
    Database cross-references and differences (RAF-indexed):
    • Uniprot P45782
      • modified residue (83)
      • modified residue (171)
      • modified residue (222)
    Domains in SCOPe 2.07: d1yf5l1, d1yf5l2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >1yf5L (L:)
megsvsefltvrlssqkeadipwlvwsaeqqeviasgqvagwealheiesyadqrsvvvl
laasdliltsveippgasrqlenmlpylledeiaqdvedvhfcvlskgretadvvgvdrl
wlracldhlkacgfdvkrvlpdvlaiprpehglaalqlgdewlvrksttqgmavdaqwls
llaasdwvqnegeylplqaltplpelslaetqewryepsglvmqlltqealtskfnlltg
sfklkslehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >1yf5L (L:)
sefltvrlssqkeadipwlvwsaeqqeviasgqvagwealheiesyadqrsvvvllaasd
liltsveippgasrqlenmlpylledeiaqdvedvhfcvlskgretadvvgvdrlwlrac
ldhlkacgfdvkrvlpdvlaiprpehglaalqlgdewlvrksttqgmavdaqwlsllaas
dwvqnegeylplqaltplpelslaetqewryepsglvmqlltqealtskfnlltgsfk