PDB entry 1y8p

View 1y8p on RCSB PDB site
Description: Crystal structure of the PDK3-L2 complex
Class: transferase
Keywords: pyruvate dehydrogenase kinase 3, lipoyl-bearing domain, protein-protein complex
Deposited on 2004-12-13, released 2005-05-24
The last revision prior to the SCOP 1.75 freeze date was dated 2005-05-24, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.63 Å
R-factor: 0.205
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 3
    Species: HOMO SAPIENS
    Gene: PDK3
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1y8pa1, d1y8pa2
  • Chain 'B':
    Compound: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
    Species: HOMO SAPIENS
    Gene: DLAT, DLTA
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1y8pb1
  • Heterogens: MG, K, LPA, ATP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1y8pA (A:)
ggshhhhhhgmarlenlyfqgkqpvpkqierysrfspsplsikqfldfgrdnacektsym
flrkelpvrlantmrevnllpdnllnrpsvglvqswymqsflelleyenkspedpqvldn
flqvlikvrnrhndvvptmaqgvieykekfgfdpfistniqyfldrfytnrisfrmlinq
htllfggdtnpvhpkhigsidptcnvadvvkdayetakmlceqyylvapeleveefnaka
pdkpiqvvyvpshlfhmlfelfknsmratvelyedrkegypavktlvtlgkedlsikisd
lgggvplrkidrlfnymystaprpsleptraaplagfgyglpisrlyaryfqgdlklysm
egvgtdaviylkalssesferlpvfnksawrhykttpeaddwsnpsseprdaskykakq

    Sequence, based on observed residues (ATOM records): (download) 
    >1y8pA (A:)
vpkqierysrfspsplsikqfldfgrdnacektsymflrkelpvrlantmrevnllpdnl
lnrpsvglvqswymqsflelleyenkspedpqvldnflqvlikvrnrhndvvptmaqgvi
eykekfgfdpfistniqyfldrfytnrisfrmlinqhtllfggdtnpvhpkhigsidptc
nvadvvkdayetakmlceqyylvapeleveefnakapdkpiqvvyvpshlfhmlfelfkn
smratvelyedrkegypavktlvtlgkedlsikisdlgggvplrkidrlfnymystaprp
lagfgyglpisrlyaryfqgdlklysmegvgtdaviylkalssesferlpvfnksawrhy
kttpeaddwsnpsseprdask

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1y8pB (B:)
ggshhhhhhgmarlenlyfqgssypphmqvllpalsptmtmgtvqrwekkvgeklsegdl
laeietdkatigfevqeegylakilvpegtrdvplgtplciivekeadisafadyrptev
tdlkpqvp

    Sequence, based on observed residues (ATOM records): (download) 
    >1y8pB (B:)
sypphmqvllpalsptmtmgtvqrwekkvgeklsegdllaeietdkatigfevqeegyla
kilvpegtrdvplgtplciivekeadisafadytdlk