PDB entry 1wuj

View 1wuj on RCSB PDB site
Description: Three-Dimensional Structure Of The Ni-B State Of [Nife]Hydrogenase From Desulufovibrio Vulgaris Miyazaki F
Class: Oxidoreductase
Keywords: High resolution crystal structure, [NiFe]hydrogenase, Oxidoreductase, Ni-B state, Ready state
Deposited on 2004-12-07, released 2005-12-07
The last revision prior to the SCOPe 2.07 freeze date was dated 2008-06-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: 0.122
AEROSPACI score: 0.74 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'L':
    Compound: Periplasmic [NiFe] hydrogenase Large subunit
    Species: Desulfovibrio vulgaris str. 'Miyazaki F' [TaxId:883]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P21852 (0-533)
      • see remark 999 (495-496)
    Domains in SCOPe 2.07: d1wujl_
  • Chain 'S':
    Compound: Periplasmic [NiFe] hydrogenase Small subunit
    Species: Desulfovibrio vulgaris str. 'Miyazaki F' [TaxId:883]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1wujs_
  • Heterogens: MG, SF4, F3S, NFO, HOH

PDB Chain Sequences:

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1wujL (L:)
ssysgpivvdpvtrieghlrievevengkvknayssstlfrgleiilkgrdprdaqhftq
rtcgvctythalastrcvdnavgvhipknatyirnlvlgaqylhdhivhfyhlhaldfvd
vtaalkadpakaakvassisprkttaadlkavqdklktfvetgqlgpftnayflgghpay
yldpetnliatahylealrlqvkaaramavfgaknphtqftvvggvtcydaltpqriaef
ealwketkafvdevyipdllvvaaaykdwtqyggtdnfitfgefpkdeydlnsrffkpgv
vfkrdfknikpfdkmqieehvrhswyegaearhpwkgqtqpkytdlhgddryswmkapry
mgepmetgplaqvliaysqghpkvkavtdavlaklgvgpealfstlgrtaargietavia
eyvgvmlqeykdniakgdnvicapwempkqaegvgfvnaprgglshwiriedgkignfql
vvpstwtlgprcdknklspveasligtpvadakrpveilrtvhsfdpciacgvh

  • Chain 'S':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1wujS (S:)
lmgprrpsvvylhnaectgcsesvlrafepyidtlildtlsldyhetimaaagdaaeaal
eqavnsphgfiavveggiptaangiygkvanhtmldicsrilpkaqaviaygtcatfggv
qaakpnptgakgvndalkhlgvkainiagcppnpynlvgtivyylknkaapeldslnrpt
mffgqtvheqcprlphfdagefapsfeseearkgwclyelgckgpvtmnncpkikfnqtn
wpvdaghpcigcsepdfwdamtpfyqn