PDB entry 1vrn
View 1vrn on RCSB PDB site
Description: photosynthetic reaction center blastochloris viridis (atcc)
Class: photosynthesis
Keywords: integral membrane protein; ubiquinone; secondary quinone (qb), photosynthesis
Deposited on
2005-02-23, released
2005-03-22
The last revision prior to the SCOPe 2.06 freeze date was dated
2011-11-16, with a file datestamp of
2011-11-11.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.191
AEROSPACI score: 0.41
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'C':
Compound: Photosynthetic reaction center cytochrome c subunit
Species: Blastochloris viridis [TaxId:1079]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1vrnc_ - Chain 'H':
Compound: reaction center protein h chain
Species: Blastochloris viridis [TaxId:1079]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1vrnh1, d1vrnh2 - Chain 'L':
Compound: reaction center protein l chain
Species: Blastochloris viridis [TaxId:1079]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1vrnl_ - Chain 'M':
Compound: reaction center protein m chain
Species: Blastochloris viridis [TaxId:1079]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1vrnm_ - Heterogens: FE2, SO4, HEM, BCB, BPB, MQ9, UQ7, NS5, LDA, HOH
PDB Chain Sequences:
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1vrnC (C:)
cfepppatttqtgfrglsmgevlhpatvkakkerdaqyppalaavkaegppvsqvyknvk
vlgnlteaeflrtmtaitewvspqegctychdennlaseakypyvvarrmlemtraintn
wtqhvaqtgvtcytchrgtplppyvryleptlplnnretpthvervetrsgyvvrlakyt
aysalnydpftmflandkrqvrvvpqtalplvgvsrgkerrplsdayatfalmmsisdsl
gtnctfchnaqtfeswgkkstpqraiawwgirmvrdlnmnylaplnaslpasrlgrqgea
pqadcrtchqgvtkplfgasrlkdypelgpik
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>1vrnH (H:)
myhgalaqhldiaqlvwyaqwlviwtvvllylrredrregyplveplglvklapedgqvy
elpypktfvlphggtvtvprrrpetrelklaqtdgfegaplqptgnplvdavgpasyaer
aevvdatvdgkakivplrvatdfsiaegdvdprglpvvaadgveagtvtdlwvdrsehyf
rylelsvagsartaliplgfcdvkkdkivvtsilseqfanvprlqsrdqitlreedkvsa
yyaggllyatperaesll
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>1vrnL (L:)
allsferkyrvrggtliggdlfdfwvgpyfvgffgvsaiffiflgvsligyaasqgptwd
pfaisinppdlkyglgaaplleggfwqaitvcalgafiswmlreveisrklgigwhvpla
fcvpifmfcvlqvfrplllgswghafpygilshldwvnnfgyqylnwhynpghmssvsfl
fvnamalglhgglilsvanpgdgdkvktaehenqyfrdvvgysigalsihrlglflasni
fltgafgtiasgpfwtrgwpewwgwwldipfws
- Chain 'M':
Sequence; same for both SEQRES and ATOM records: (download)
>1vrnM (M:)
adyqtiytqiqargphitvsgewgdndrvgkpfysywlgkigdaqigpiylgasgiaafa
fgstailiilfnmaaevhfdplqffrqffwlglyppkaqygmgipplhdggwwlmaglfm
tlslgswwirvysraralglgthiawnfaaaiffvlcigcihptlvgswsegvpfgiwph
idwltafsirygnfyycpwhgfsigfaygcgllfaahgatilavarfggdreieqitdrg
taveraalfwrwtigfnatiesvhrwgwffslmvmvsasvgilltgtfvdnwylwcvkhg
aapdypaylpatpdpaslpgapk