PDB entry 1vpk
View 1vpk on RCSB PDB site
Description: Crystal structure of DNA polymerase III, beta subunit (TM0262) from Thermotoga maritima at 2.00 A resolution
Class: transferase
Keywords: TM0262, DNA Polymerase III, beta subunit, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI, TRANSFERASE
Deposited on
2004-11-09, released
2004-11-23
The last revision prior to the SCOPe 2.02 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.198
AEROSPACI score: 0.45
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA polymerase III, beta subunit
Species: THERMOTOGA MARITIMA [TaxId:243274]
Gene: TM0262
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.02: d1vpka1, d1vpka2, d1vpka3 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1vpkA (A:)
mgsdkihhhhhhmkvtvttlelkdkitiaskalakksvkpilagflfevkdgnfyicatd
letgvkatvnaaeisgearfvvpgdviqkmvkvlpdeitelslegdalvissgstvfrit
tmpadefpeitpaesgitfevdtslleemvekvifaaakdefmrnlngvfwelhknllrl
vasdgfrlalaeeqieneeeasfllslksmkevqnvldntteptitvrydgrrvslstnd
vetvmrvvdaefpdykrvipetfktkvvvsrkelreslkrvmviaskgsesvkfeieenv
mrlvskspdygevvdevevqkegedlviafnpkfiedvlkhieteeiemnfvdstspcqi
npldisgylyivmpirla
Sequence, based on observed residues (ATOM records): (download)
>1vpkA (A:)
hmkvtvttlelkdkitiaskalakksvkpilagflfevkdgnfyicatdletgvkatvna
aeisgearfvvpgdviqkmvkvlpdeitelslegdalvissgstvfrittmpadefpeit
paesgitfevdtslleemvekvifaaakdefmrnlngvfwelhknllrlvasdgfrlala
eeqieneeeasfllslksmkevqnvldntteptitvrydgrrvslstndvetvmrvvdae
fpdykrvipetfktkvvvsrkelreslkrvmviaskgsesvkfeieenvmrlvskspdyg
evvdevevqkegedlviafnpkfiedvlkhieteeiemnfvdstspcqinpldisgylyi
vmpirla