PDB entry 1vpa
View 1vpa on RCSB PDB site
Description: Crystal structure of 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (TM1393) from Thermotoga maritima at 2.67 A resolution
Class: transferase
Keywords: TM1393, 2-C-methyl-d-erythritol 4-phosphate cytidylyltransferase, structural genomics, JCSG, Joint Center for Structural Genomics, PSI, protein structure initiative, TRANSFERASE
Deposited on
2004-10-14, released
2004-11-02
The last revision prior to the SCOPe 2.03 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.67 Å
R-factor: 0.202
AEROSPACI score: 0.3
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase
Species: Thermotoga maritima [TaxId:2336]
Gene: TM1393, ispD
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1vpaa_ - Chain 'B':
Compound: 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase
Species: Thermotoga maritima [TaxId:2336]
Gene: TM1393, ispD
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1vpab_ - Heterogens: MG, CTP, ACY, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1vpaA (A:)
mgsdkihhhhhhmnvaillaagkgermsenvpkqfleiegrmlfeyplstflkseaidgv
vivtrrewfevvekrvfhekvlgiveggdtrsqsvrsaleflekfspsyvlvhdsarpfl
rkkhvsevlrraretgaatlalknsdalvrvendrieyiprkgvyriltpqafsyeilkk
ahenggewaddtepvqklgvkialvegdplcfkvtfkedlelariiarewerip
Sequence, based on observed residues (ATOM records): (download)
>1vpaA (A:)
hhmnvaillaagkgermsenvpkqfleiegrmlfeyplstflkseaidgvvivtrrewfe
vvekrvfhekvlgiveggdtrsqsvrsaleflekfspsyvlvhdsarpflrkkhvsevlr
raretgaatlalknsdalvrvendrieyiprkgvyriltpqafsyeilkkahenggewad
dtepvqklgvkialvegdplcfkvtfkedlelariiarewe
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1vpaB (B:)
mgsdkihhhhhhmnvaillaagkgermsenvpkqfleiegrmlfeyplstflkseaidgv
vivtrrewfevvekrvfhekvlgiveggdtrsqsvrsaleflekfspsyvlvhdsarpfl
rkkhvsevlrraretgaatlalknsdalvrvendrieyiprkgvyriltpqafsyeilkk
ahenggewaddtepvqklgvkialvegdplcfkvtfkedlelariiarewerip
Sequence, based on observed residues (ATOM records): (download)
>1vpaB (B:)
hhmnvaillaagkgermsenvpkqfleiegrmlfeyplstflkseaidgvvivtrrewfe
vvekrvfhekvlgiveggdtrsqsvrsaleflekfspsyvlvhdsarpflrkkhvsevlr
raretgaatlalknsdalvrvendrieyiprkgvyriltpqafsyeilkkahenggewad
dtepvqklgvkialvegdplcfkvtfkedlelariiarew