PDB entry 1vp8

View 1vp8 on RCSB PDB site
Description: CRYSTAL STRUCTURE OF an alpha/beta domain of a putative pyruvate kinase (AF0103) FROM ARCHAEOGLOBUS FULGIDUS DSM 4304 AT 1.30 A RESOLUTION
Class: flavoprotein
Keywords: putative pyruvate kinase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi, flavoprotein
Deposited on 2004-10-14, released 2004-10-26
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.3 Å
R-factor: 0.155
AEROSPACI score: 0.77 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hypothetical protein AF0103
    Species: ARCHAEOGLOBUS FULGIDUS [TaxId:224325]
    Gene: NP_068944.1
    Database cross-references and differences (RAF-indexed):
    • Uniprot O30133 (12-200)
      • leader sequence (11)
      • modified residue (12)
      • modified residue (57)
      • modified residue (62)
      • modified residue (85)
      • modified residue (148)
      • modified residue (181)
      • modified residue (195)
    Domains in SCOPe 2.07: d1vp8a1, d1vp8a2
  • Heterogens: FMN, UNL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1vp8A (A:)
mgsdkihhhhhhmekkivyfnkpgrenteetlrlaverakelgikhlvvassygdtamka
lemaeglevvvvtyhtgfvregentmppeveeelrkrgakivrqshilsglersisrklg
gvsrteaiaealrslfghglkvcveitimaadsgaipieevvavggrsrgadtavvirpa
hmnnffdaeikeiicmprnkr

    Sequence, based on observed residues (ATOM records): (download) 
    >1vp8A (A:)
hmekkivyfnkpgrenteetlrlaverakelgikhlvvassygdtamkalemaeglevvv
vtyhtgfvregentmppeveeelrkrgakivrqshilsglersisrklggvsrteaiaea
lrslfghglkvcveitimaadsgaipieevvavggrsrgadtavvirpahmnnffdaeik
eiicmprnkr