PDB entry 1ur5

View 1ur5 on RCSB PDB site
Description: stabilization of a tetrameric malate dehydrogenase by introduction of a disulfide bridge at the dimer/dimer interface
Class: oxidoreductase
Keywords: oxidoreductase, tricarboxylic acid cycle, malate dehydrogenase
Deposited on 2003-10-27, released 2003-11-05
The last revision prior to the SCOPe 2.02 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: 0.19
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: malate dehydrogenase
    Species: Chloroflexus aurantiacus [TaxId:1108]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80040
      • engineered mutation (186)
    Domains in SCOPe 2.02: d1ur5a1, d1ur5a2
  • Chain 'C':
    Compound: malate dehydrogenase
    Species: Chloroflexus aurantiacus [TaxId:1108]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P80040 (Start-308)
      • engineered mutation (186)
    Domains in SCOPe 2.02: d1ur5c1, d1ur5c2
  • Heterogens: NAD, CD, CL, NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1ur5A (A:)
mrkkisiigagfvgsttahwlaakelgdivlldivegvpqgkaldlyeaspiegfdvrvt
gtnnyadtansdvivvtsgaprkpgmsredlikvnaditracisqaaplspnaviimvnn
pldamtylaaevsgfpkervigqagvldaaryrtfiameagvsvedvqamlmgghgdemv
plprfscisgipvsefiapdrlaqivertrkgggeivnllktgsayyapaaataqmveav
lkdkkrvmpvaayltgqyglndiyfgvpvilgaggvekilelplneeemallnasakavr
atldtlksl

    Sequence, based on observed residues (ATOM records): (download) 
    >1ur5A (A:)
rkkisiigagfvgsttahwlaakelgdivlldivegvpqgkaldlyeaspiegfdvrvtg
tnnyadtansdvivvtsgaedlikvnaditracisqaaplspnaviimvnnpldamtyla
aevsgfpkervigqagvldaaryrtfiameagvsvedvqamlmgghgdemvplprfscis
gipvsefiapdrlaqivertrkgggeivnllktgsayyapaaataqmveavlkdkkrvmp
vaayltgqyglndiyfgvpvilgaggvekilelplneeemallnasakavratldtlks

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1ur5C (C:)
mrkkisiigagfvgsttahwlaakelgdivlldivegvpqgkaldlyeaspiegfdvrvt
gtnnyadtansdvivvtsgaprkpgmsredlikvnaditracisqaaplspnaviimvnn
pldamtylaaevsgfpkervigqagvldaaryrtfiameagvsvedvqamlmgghgdemv
plprfscisgipvsefiapdrlaqivertrkgggeivnllktgsayyapaaataqmveav
lkdkkrvmpvaayltgqyglndiyfgvpvilgaggvekilelplneeemallnasakavr
atldtlksl

    Sequence, based on observed residues (ATOM records): (download) 
    >1ur5C (C:)
rkkisiigagfvgsttahwlaakelgdivlldivegvpqgkaldlyeaspiegfdvrvtg
tnnyadtansdvivvtsgaredlikvnaditracisqaaplspnaviimvnnpldamtyl
aaevsgfpkervigqagvldaaryrtfiameagvsvedvqamlmgghgdemvplprfsci
sgipvsefiapdrlaqivertrkgggeivnllktgsayyapaaataqmveavlkdkkrvm
pvaayltgqyglndiyfgvpvilgaggvekilelplneeemallnasakavratldtlks
l