PDB entry 1ub0

View 1ub0 on RCSB PDB site
Description: Crystal Structure Analysis of Phosphomethylpyrimidine Kinase (ThiD) from Thermus Thermophilus Hb8
Class: transferase
Keywords: Thiamin biosynthesis, ThiD, Ribokinase family, Phosphorylation, structural genomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSFERASE
Deposited on 2003-03-26, released 2003-04-08
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: 0.207
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: phosphomethylpyrimidine kinase
    Species: Thermus thermophilus [TaxId:274]
    Gene: thiD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1ub0a_
  • Heterogens: SO4, DIO, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1ub0A (A:)
mrvaltiagsdsgggagvqadlkvffrfgvygtsaltlvtaqntlgvqrvhllppevvya
qiesvaqdfplhaaktgalgdaaiveavaeavrrfgvrplvvdpvmvaksgdpllakeaa
aalkerlfpladlvtpnrleaeallgrpirtlkeaeeaakallalgpkavllkgghlege
eavdllatrggvlrfsaprvhtrnthgtgctlsaaiaallakgrplaeavaeakayltra
lktapslghghgpldhwa

    Sequence, based on observed residues (ATOM records): (download) 
    >1ub0A (A:)
mrvaltiagsdsgggagvqadlkvffrfgvygtsaltlvtaqntlgvqrvhllppevvya
qiesvaqdfplhaaktgalgdaaiveavaeavrrfgvrplvvdpvmakeaaaalkerlfp
ladlvtpnrleaeallgrpirtlkeaeeaakallalgpkavllkgghleavdllatrggv
lrfsaprvhtrnthgtgctlsaaiaallakgrplaeavaeakayltralktapslghghg
pldhwa