PDB entry 1tbu
View 1tbu on RCSB PDB site
Description: Crystal structure of N-terminal domain of yeast peroxisomal thioesterase-1
Class: hydrolase
Keywords: Yeast peroxisomal thioesterase; X-ray structure; domain swapping; iodine soak; SIRAS, HYDROLASE
Deposited on
2004-05-20, released
2005-10-04
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.216
AEROSPACI score: 0.36
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Peroxisomal acyl-coenzyme A thioester hydrolase 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: PTE1, TES1, YJR019C, J1456
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1tbua1 - Chain 'B':
Compound: Peroxisomal acyl-coenzyme A thioester hydrolase 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: PTE1, TES1, YJR019C, J1456
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1tbub_ - Chain 'C':
Compound: Peroxisomal acyl-coenzyme A thioester hydrolase 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: PTE1, TES1, YJR019C, J1456
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1tbuc_ - Chain 'D':
Compound: Peroxisomal acyl-coenzyme A thioester hydrolase 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: PTE1, TES1, YJR019C, J1456
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1tbud_ - Heterogens: FMT, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1tbuA (A:)
msaskmamsnlekilelvplsptsfvtkylpaapvgskgtfggtlvsqsllaslhtvpln
ffptslhsyfikggdprtkityhvqnlrngrnfihkqvsayqhdkliftsmilfavqr
Sequence, based on observed residues (ATOM records): (download)
>1tbuA (A:)
kilelvplsptsfvtkylptfggtlvsqsllaslhtvplnffptslhsyfikggdprtki
tyhvqnlrngrnfihkqvsayqhdkliftsmilfav
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1tbuB (B:)
msaskmamsnlekilelvplsptsfvtkylpaapvgskgtfggtlvsqsllaslhtvpln
ffptslhsyfikggdprtkityhvqnlrngrnfihkqvsayqhdkliftsmilfavqr
Sequence, based on observed residues (ATOM records): (download)
>1tbuB (B:)
kilelvplsptsfvtkylgtfggtlvsqsllaslhtvplnffptslhsyfikggdprtki
tyhvqnlrngrnfihkqvsayqhdkliftsmilfavqr
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1tbuC (C:)
msaskmamsnlekilelvplsptsfvtkylpaapvgskgtfggtlvsqsllaslhtvpln
ffptslhsyfikggdprtkityhvqnlrngrnfihkqvsayqhdkliftsmilfavqr
Sequence, based on observed residues (ATOM records): (download)
>1tbuC (C:)
ilelvplsptsfvtkylptfggtlvsqsllaslhtvplnffptslhsyfikggdprtkit
yhvqnlrngrnfihkqvsayqhdkliftsmilfavq
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1tbuD (D:)
msaskmamsnlekilelvplsptsfvtkylpaapvgskgtfggtlvsqsllaslhtvpln
ffptslhsyfikggdprtkityhvqnlrngrnfihkqvsayqhdkliftsmilfavqr
Sequence, based on observed residues (ATOM records): (download)
>1tbuD (D:)
ilelvplsptsfvtkylgtfggtlvsqsllaslhtvplnffptslhsyfikggdprtkit
yhvqnlrngrnfihkqvsayqhdkliftsmilfavqr