SCOPe 2.07: Structural Classification of Proteins

PDB entry 1t60

View 1t60 on RCSB PDB site
Description: Crystal structure of Type IV collagen NC1 domain from bovine lens capsule
Class: structural protein
Keywords: basement membrane, type IV collagen, nc1 domain, structural protein
Deposited on 2004-05-05, released 2004-09-21
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: 0.189
AEROSPACI score: 0.59 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60a1, d1t60a2
Chain 'B':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60b1, d1t60b2
Chain 'C':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60c1, d1t60c2
Chain 'D':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60d1, d1t60d2
Chain 'E':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60e1, d1t60e2
Chain 'F':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60f1, d1t60f2
Chain 'G':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60 (Start-228)
Domains in SCOPe 2.07: d1t60g1, d1t60g2
Chain 'H':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60 (Start-228)
Domains in SCOPe 2.07: d1t60h1, d1t60h2
Chain 'I':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60i1, d1t60i2
Chain 'J':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60j1, d1t60j2
Chain 'K':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60k1, d1t60k2
Chain 'L':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60l1, d1t60l2
Chain 'M':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60m1, d1t60m2
Chain 'N':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60 (Start-228)
Domains in SCOPe 2.07: d1t60n1, d1t60n2
Chain 'O':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60o1, d1t60o2
Chain 'P':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60p1, d1t60p2
Chain 'Q':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60q1, d1t60q2
Chain 'R':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60r1, d1t60r2
Chain 'S':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60s1, d1t60s2
Chain 'T':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60 (Start-228)
Domains in SCOPe 2.07: d1t60t1, d1t60t2
Chain 'U':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60u1, d1t60u2
Chain 'V':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60v1, d1t60v2
Chain 'W':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60w1, d1t60w2
Chain 'X':
Compound: type iv collagen
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
- PDB 1T60
Domains in SCOPe 2.07: d1t60x1, d1t60x2
Heterogens: K, CL, MPD, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1t60A (A:)
svdhgflvtrhsqttddpqcppgtkilyhgysllyvqgnerahgqdlgtagsclrkfstm
pflfcninnvcnfasrndysywlstpepmpmsmapitgenirpfisrcavceapamvmav
hsqtiqipqcptgwsslwigysfvmhtsagaegsgqalaspgscleefrsapfiechgrg
tcnyyanaysfwlatiersemfkkptpstlkagelrthvsrcqvcmrrt