PDB entry 1svo

View 1svo on RCSB PDB site
Description: Structure of SV40 large T antigen helicase domain
Class: Viral protein
Keywords: AAA+ fold
Deposited on 2004-03-29, released 2004-10-19
The last revision prior to the SCOP 1.73 freeze date was dated 2004-10-19, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.233
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: large t antigen
    Species: Simian virus 40
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1svoa_
  • Chain 'B':
    Compound: large t antigen
    Species: Simian virus 40
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1svob_
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1svoA (A:)
glkehdfnpeeaeetkqvswklvteyametkcddvllllgmylefqysfemclkcikkeq
pshykyhekhyanaaifadsknqkticqqavdtvlakkrvdslqltreqmltnrfndlld
rmdimfgstgsadieewmagvawlhcllpkmdsvvydflkcmvynipkkrywlfkgpids
gkttlaaallelcggkalnvnlpldrlnfelgvaidqflvvfedvkgtggesrdlpsgqg
innldnlrdyldgsvkvnlekkhlnkrtqifppgivtmneysvpktlqarfvkqidfrpk
dylkhclersefllekriiqsgialllmliwyrpvaefaqsiqsrivewkerldkefsls
vyqkmkfnvamgigvld

    Sequence, based on observed residues (ATOM records): (download) 
    >1svoA (A:)
kqvswklvteyametkcddvllllgmylefqysfemclkcikkeqpshykyhekhyanaa
ifadsknqkticqqavdtvlakkrvdslqltreqmltnrfndlldrmdimfgstgsadie
ewmagvawlhcllpkmdsvvydflkcmvynipkkrywlfkgpidsgkttlaaallelcgg
kalnvnlpldrlnfelgvaidqflvvfedvkgtggesrdlpsgqginnldnlrdyldgsv
kvnlekkhlnkrtqifppgivtmneysvpktlqarfvkqidfrpkdylkhclerseflle
kriiqsgialllmliwyrpvaefaqsiqsrivewkerldkefslsvyqkmkfnvamgigv
ld

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1svoB (B:)
glkehdfnpeeaeetkqvswklvteyametkcddvllllgmylefqysfemclkcikkeq
pshykyhekhyanaaifadsknqkticqqavdtvlakkrvdslqltreqmltnrfndlld
rmdimfgstgsadieewmagvawlhcllpkmdsvvydflkcmvynipkkrywlfkgpids
gkttlaaallelcggkalnvnlpldrlnfelgvaidqflvvfedvkgtggesrdlpsgqg
innldnlrdyldgsvkvnlekkhlnkrtqifppgivtmneysvpktlqarfvkqidfrpk
dylkhclersefllekriiqsgialllmliwyrpvaefaqsiqsrivewkerldkefsls
vyqkmkfnvamgigvld

    Sequence, based on observed residues (ATOM records): (download) 
    >1svoB (B:)
kqvswklvteyametkcddvllllgmylefqysfemclkcikkeqpshykyhekhyanaa
ifadsknqkticqqavdtvlakkrvdslqltreqmltnrfndlldrmdimfgstgsadie
ewmagvawlhcllpkmdsvvydflkcmvynipkkrywlfkgpidsgkttlaaallelcgg
kalnvnlpldrlnfelgvaidqflvvfedvkgtggesrdlpsgqginnldnlrdyldgsv
kvnlekkhlnkrtqifppgivtmneysvpktlqarfvkqidfrpkdylkhclerseflle
kriiqsgialllmliwyrpvaefaqsiqsrivewkerldkefslsvyqkmkfnvamgigv
ld