PDB entry 1s5u

View 1s5u on RCSB PDB site
Description: Crystal Structure of Hypothetical Protein EC709 from Escherichia coli
Class: hydrolase
Keywords: Structural genomics, Hypothetical protein, Thioesterase fold, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG
Deposited on 2004-01-21, released 2004-05-11
The last revision prior to the SCOP 1.73 freeze date was dated 2005-01-18, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.2
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein ybgC
    Species: Escherichia coli
    Gene: YBGC, B0736, C0815, Z0904, ECS0771, SF0561, S0574
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1s5ua_
  • Chain 'B':
    Compound: Protein ybgC
    Species: Escherichia coli
    Gene: YBGC, B0736, C0815, Z0904, ECS0771, SF0561, S0574
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1s5ub_
  • Chain 'C':
    Compound: Protein ybgC
    Species: Escherichia coli
    Gene: YBGC, B0736, C0815, Z0904, ECS0771, SF0561, S0574
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1s5uc_
  • Chain 'D':
    Compound: Protein ybgC
    Species: Escherichia coli
    Gene: YBGC, B0736, C0815, Z0904, ECS0771, SF0561, S0574
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1s5ud_
  • Chain 'E':
    Compound: Protein ybgC
    Species: Escherichia coli
    Gene: YBGC, B0736, C0815, Z0904, ECS0771, SF0561, S0574
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A8Z3 (2-135)
      • cloning artifact (0-1)
    Domains in SCOP 1.73: d1s5ue_
  • Chain 'F':
    Compound: Protein ybgC
    Species: Escherichia coli
    Gene: YBGC, B0736, C0815, Z0904, ECS0771, SF0561, S0574
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1s5uf_
  • Chain 'G':
    Compound: Protein ybgC
    Species: Escherichia coli
    Gene: YBGC, B0736, C0815, Z0904, ECS0771, SF0561, S0574
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1s5ug_
  • Chain 'H':
    Compound: Protein ybgC
    Species: Escherichia coli
    Gene: YBGC, B0736, C0815, Z0904, ECS0771, SF0561, S0574
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1s5uh_
  • Heterogens: SO4, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1s5uA (A:)
ghmnttlfrwpvrvyyedtdaggvvyhasyvafyerartemlrhhhfsqqalmaervafv
vrkmtveyyaparlddmleiqteitsmrgtslvftqrivnaentllneaevlvvcvdplk
mkpralpksivaefkqgs

    Sequence, based on observed residues (ATOM records): (download) 
    >1s5uA (A:)
tlfrwpvrvyyedtdaggvvyhasyvafyerartemlrhhhfsqqalmaervafvvrkmt
veyyaparlddmleiqteitsmrgtslvftqrivnaentllneaevlvvcvdplkmkpra
lpksivaef

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1s5uB (B:)
ghmnttlfrwpvrvyyedtdaggvvyhasyvafyerartemlrhhhfsqqalmaervafv
vrkmtveyyaparlddmleiqteitsmrgtslvftqrivnaentllneaevlvvcvdplk
mkpralpksivaefkqgs

    Sequence, based on observed residues (ATOM records): (download) 
    >1s5uB (B:)
lfrwpvrvyyedtdaggvvyhasyvafyerartemlrhhhfsqqalmaervafvvrkmtv
eyyaparlddmleiqteitsmrgtslvftqrivnaentllneaevlvvcvdplkmkpral
pksivaef

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1s5uC (C:)
ghmnttlfrwpvrvyyedtdaggvvyhasyvafyerartemlrhhhfsqqalmaervafv
vrkmtveyyaparlddmleiqteitsmrgtslvftqrivnaentllneaevlvvcvdplk
mkpralpksivaefkqgs

    Sequence, based on observed residues (ATOM records): (download) 
    >1s5uC (C:)
tlfrwpvrvyyedtdaggvvyhasyvafyerartemlrhhhfsqqalmaervafvvrkmt
veyyaparlddmleiqteitsmrgtslvftqrivnaentllneaevlvvcvdplkmkpra
lpksivaefk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1s5uD (D:)
ghmnttlfrwpvrvyyedtdaggvvyhasyvafyerartemlrhhhfsqqalmaervafv
vrkmtveyyaparlddmleiqteitsmrgtslvftqrivnaentllneaevlvvcvdplk
mkpralpksivaefkqgs

    Sequence, based on observed residues (ATOM records): (download) 
    >1s5uD (D:)
tlfrwpvrvyyedtdaggvvyhasyvafyerartemlrhhhfsqqalmaervafvvrkmt
veyyaparlddmleiqteitsmrgtslvftqrivnaentllneaevlvvcvdplkmkpra
lpksivaef

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1s5uE (E:)
ghmnttlfrwpvrvyyedtdaggvvyhasyvafyerartemlrhhhfsqqalmaervafv
vrkmtveyyaparlddmleiqteitsmrgtslvftqrivnaentllneaevlvvcvdplk
mkpralpksivaefkqgs

    Sequence, based on observed residues (ATOM records): (download) 
    >1s5uE (E:)
ghmnttlfrwpvrvyyedtdaggvvyhasyvafyerartemlrhhhfsqqalmaervafv
vrkmtveyyaparlddmleiqteitsmrgtslvftqrivnaentllneaevlvvcvdplk
mkpralpksivaefkq

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1s5uF (F:)
ghmnttlfrwpvrvyyedtdaggvvyhasyvafyerartemlrhhhfsqqalmaervafv
vrkmtveyyaparlddmleiqteitsmrgtslvftqrivnaentllneaevlvvcvdplk
mkpralpksivaefkqgs

    Sequence, based on observed residues (ATOM records): (download) 
    >1s5uF (F:)
tlfrwpvrvyyedtdaggvvyhasyvafyerartemlrhhhfsqqalmaervafvvrkmt
veyyaparlddmleiqteitsmrgtslvftqrivnaentllneaevlvvcvdplkmkpra
lpksivaefk

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1s5uG (G:)
ghmnttlfrwpvrvyyedtdaggvvyhasyvafyerartemlrhhhfsqqalmaervafv
vrkmtveyyaparlddmleiqteitsmrgtslvftqrivnaentllneaevlvvcvdplk
mkpralpksivaefkqgs

    Sequence, based on observed residues (ATOM records): (download) 
    >1s5uG (G:)
ttlfrwpvrvyyedtdaggvvyhasyvafyerartemlrhhhfsqqalmaervafvvrkm
tveyyaparlddmleiqteitsmrgtslvftqrivnaentllneaevlvvcvdplkmkpr
alpksivaef

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1s5uH (H:)
ghmnttlfrwpvrvyyedtdaggvvyhasyvafyerartemlrhhhfsqqalmaervafv
vrkmtveyyaparlddmleiqteitsmrgtslvftqrivnaentllneaevlvvcvdplk
mkpralpksivaefkqgs

    Sequence, based on observed residues (ATOM records): (download) 
    >1s5uH (H:)
ttlfrwpvrvyyedtdaggvvyhasyvafyerartemlrhhhfsqqalmaervafvvrkm
tveyyaparlddmleiqteitsmrgtslvftqrivnaentllneaevlvvcvdplkmkpr
alpksivaef