PDB entry 1rp5

View 1rp5 on RCSB PDB site
Description: PBP2x from Streptococcus pneumoniae strain 5259 with reduced susceptibility to beta-lactam antibiotics
Class: transpeptidase
Keywords: penicillin-binding protein, transpeptidase, antibiotic resistance, peptidoglycan synthesis, cell wall, transmembrane
Deposited on 2003-12-03, released 2004-02-03
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.231
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: penicillin-binding protein 2x
    Species: Streptococcus pneumoniae [TaxId:1313]
    Gene: PBP2X
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1rp5a1, d1rp5a2, d1rp5a3, d1rp5a4
  • Chain 'B':
    Compound: penicillin-binding protein 2x
    Species: Streptococcus pneumoniae [TaxId:1313]
    Gene: PBP2X
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1rp5b1, d1rp5b2, d1rp5b3, d1rp5b4
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1rp5A (A:)
gtgtrfgtdlakeakkvhqttrtvpakrgtiydrngvpiaedatsynvyavidenyksat
gkilyvektqfnkvaevfhkyldmeesyvreqlsqpnlkqvsfgakgngityanmmsikk
eletaevkgidfttspnrsypngqfassfiglaqlhenedgsksllgtsgmesslnsila
gtdgiityekdrlgnivpgteqvsqqtvdgkdvyttissplqsfmetqmdafqekvkgky
mtatlvsaktgeilattqrptfdadtkegitedfvwrdilyqsnyepgstmkvmmlaaai
dnntfpggevfnsselkiadatirdwdvnegltggrmmtfsqgfahssnvgmtlleqkmg
datwldylnrfkfgvptrfgltdeyagqlpadnivniamsafgqgisvtqtqmlraftai
andgvmlepkfisalydpndqsvrksqkeivgnpvskeaasvtrdhmvmvgtdptygtmy
nhstgkatvnvpgqnvalksgtaeiadeknggyltgstnnifsvvsmhpaenpdfilyvt
vqqpehysgiqlgefanpilerasamkeslnlqttakaleqvsqqspypmpsvkdispgd
laeelrrnlvqpivvgtgtkiknssaeegknlapnqqvlilsdkaeevpdmygwtketae
tfakwlnielefegsgstvqkqdvrantaikdikkikltlgd

    Sequence, based on observed residues (ATOM records): (download) 
    >1rp5A (A:)
kvhqttrtvpakrgtiydrngvpiaedatsynvyavidenyksatgkilyvektqfnkva
evfhkyldmeesyvreqlsqpnlkqvsfgakgngityanmmsikkeletaevkgidftts
pnrsypngqfassfiglaqlhenedgsksllgtsgmesslnsilagtdgiityekdrlgn
ivpgteqvsqqtvdgkdvyttissplqsfmetqmdafqekvkgkymtatlvsaktgeila
ttqrptfdadtkegitedfvwrdilyqsnyepgstmkvmmlaaaidnntfpggevfnsse
lkiadatirdwdvnegltggrmmtfsqgfahssnvgmtlleqkmgdatwldylnrfkfgv
ptrfgltdeyagqlpadnivniamsafgqgisvtqtqmlraftaiandgvmlepkfisal
ydpndqsvrksqkeivgnpvskeaasvtrdhmvmvgtdptygtmynhstgkatvnvpgqn
valksgtaeiadeknggyltgstnnifsvvsmhpaenpdfilyvtvqqpehysgiqlgef
anpilerasamkeslnlqttakaleqvsqqspypmpsvkdispgdlaeelrrnlvqpivv
gtgtkiknssaeegknlapnqqvlilsdkaeevpdmygwtketaetfakwlnielefegs
gstvqkqdvrantaikdikkikltlgd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1rp5B (B:)
gtgtrfgtdlakeakkvhqttrtvpakrgtiydrngvpiaedatsynvyavidenyksat
gkilyvektqfnkvaevfhkyldmeesyvreqlsqpnlkqvsfgakgngityanmmsikk
eletaevkgidfttspnrsypngqfassfiglaqlhenedgsksllgtsgmesslnsila
gtdgiityekdrlgnivpgteqvsqqtvdgkdvyttissplqsfmetqmdafqekvkgky
mtatlvsaktgeilattqrptfdadtkegitedfvwrdilyqsnyepgstmkvmmlaaai
dnntfpggevfnsselkiadatirdwdvnegltggrmmtfsqgfahssnvgmtlleqkmg
datwldylnrfkfgvptrfgltdeyagqlpadnivniamsafgqgisvtqtqmlraftai
andgvmlepkfisalydpndqsvrksqkeivgnpvskeaasvtrdhmvmvgtdptygtmy
nhstgkatvnvpgqnvalksgtaeiadeknggyltgstnnifsvvsmhpaenpdfilyvt
vqqpehysgiqlgefanpilerasamkeslnlqttakaleqvsqqspypmpsvkdispgd
laeelrrnlvqpivvgtgtkiknssaeegknlapnqqvlilsdkaeevpdmygwtketae
tfakwlnielefegsgstvqkqdvrantaikdikkikltlgd

    Sequence, based on observed residues (ATOM records): (download) 
    >1rp5B (B:)
kvhqttrtvpakrgtiydrngvpiaedatsynvyavidenyksatgkilyvektqfnkva
evfhkyldmeesyvreqlsqpnlkqvsfgakgngityanmmsikkeletaevkgidftts
pnrsypngqfassfiglaqlhenedgsksllgtsgmesslnsilagtdgiityekdrlgn
ivpgteqvsqqtvdgkdvyttissplqsfmetqmdafqekvkgkymtatlvsaktgeila
ttqrptfdadtkegitedfvwrdilyqsnyepgstmkvmmlaaaidnntfpggevfnsse
lkiadatirdwdvrmmtfsqgfahssnvgmtlleqkmgdatwldylnrfkfgvptrfglt
deyagqlpadnivniamsafgqgisvtqtqmlraftaiandgvmlepkfisalydpndqs
vrksqkeivgnpvskeaasvtrdhmvmvgtdptygtmynhstgkatvnvpgqnvalksgt
aeiadeknggyltgstnnifsvvsmhpaenpdfilyvtvqqpehysgiqlgefanpiler
asamkeslnlqttakaleqvsqqspypmpsvkdispgdlaeelrrnlvqpivvgtgtkik
nssaeegknlapnqqvlilsdkaeevpdmygwtketaetfakwlnielefegsgstvqkq
dvrantaikdikkikltlgd