PDB entry 1rkt
View 1rkt on RCSB PDB site
Description: Crystal structure of yfiR, a putative transcriptional regulator from Bacillus subtilis
Class: transcription
Keywords: transcription regulator, Structural Genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, transcription
Deposited on
2003-11-23, released
2004-04-13
The last revision prior to the SCOPe 2.07 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.21
AEROSPACI score: 0.45
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: protein yfiR
Species: Bacillus subtilis [TaxId:1423]
Gene: yfiR
Database cross-references and differences (RAF-indexed):
- Uniprot O31560 (Start-204)
- modified residue (34)
- modified residue (58)
- modified residue (166)
Domains in SCOPe 2.07: d1rkta1, d1rkta2 - Chain 'B':
Compound: protein yfiR
Species: Bacillus subtilis [TaxId:1423]
Gene: yfiR
Database cross-references and differences (RAF-indexed):
- Uniprot O31560 (Start-204)
- modified residue (34)
- modified residue (58)
- modified residue (166)
Domains in SCOPe 2.07: d1rktb1, d1rktb2 - Heterogens: UNX, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1rktA (A:)
mspkvtkehkdkrqaeileaaktvfkrkgfelttmkdvveesgfsrggvylyfssteemf
rriietgldeglrkldksaehqsvwasissyldelteglrdvadtlapvqfeylvtawrn
eerrqylekrydlfverfsrllqkgidqgefqpvqplatiakfflnmndgiiqnalyfde
ekadvsglaesaklylktvlqadek
Sequence, based on observed residues (ATOM records): (download)
>1rktA (A:)
spkvtkehkdkrqaeileaaktvfkrkgfelttmkdvveesgfsrggvylyfssteemfr
riietgldeglrkldksaehqsvwasissyldelteglrdvadtlapvqfeylvtawrne
errqylekrydlfverfsrllqkgidqgefqpvqplatiakfflnmndgiiqnalyfdee
kadvsglaesaklylktvlqadek
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1rktB (B:)
mspkvtkehkdkrqaeileaaktvfkrkgfelttmkdvveesgfsrggvylyfssteemf
rriietgldeglrkldksaehqsvwasissyldelteglrdvadtlapvqfeylvtawrn
eerrqylekrydlfverfsrllqkgidqgefqpvqplatiakfflnmndgiiqnalyfde
ekadvsglaesaklylktvlqadek
Sequence, based on observed residues (ATOM records): (download)
>1rktB (B:)
tkehkdkrqaeileaaktvfkrkgfelttmkdvveesgfsrggvylyfssteemfrriie
tgldeglrkldksaehqsvwasissyldelteglrdvadtlapvqfeylvtawrneerrq
ylekrydlfverfsrllqkgidqgefqpvqplatiakfflnmndgiiqnalyfdeekadv
sglaesaklylktvlqadek