PDB entry 1rjn

View 1rjn on RCSB PDB site
Description: The Crystal Structure of MenB (Rv0548c) from Mycobacterium tuberculosis in Complex with the CoA Portion of Naphthoyl CoA
Class: lyase
Keywords: crotonase-like family, beta-beta-alpha, Structural Genomics, PSI, Protein Structure Initiative, TB Structural Genomics Consortium, TBSGC, LYASE
Deposited on 2003-11-19, released 2004-11-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-07-21, with a file datestamp of 2021-07-16.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: menB
    Species: Mycobacterium tuberculosis [TaxId:1773]
    Gene: MenB (Rv0548c)
    Database cross-references and differences (RAF-indexed):
    • Uniprot O06414 (25-338)
      • expression tag (0-24)
    Domains in SCOPe 2.08: d1rjna_
  • Chain 'B':
    Compound: menB
    Species: Mycobacterium tuberculosis [TaxId:1773]
    Gene: MenB (Rv0548c)
    Database cross-references and differences (RAF-indexed):
    • Uniprot O06414 (25-338)
      • expression tag (0-24)
    Domains in SCOPe 2.08: d1rjnb_
  • Chain 'C':
    Compound: menB
    Species: Mycobacterium tuberculosis [TaxId:1773]
    Gene: MenB (Rv0548c)
    Database cross-references and differences (RAF-indexed):
    • Uniprot O06414 (25-338)
      • expression tag (0-24)
    Domains in SCOPe 2.08: d1rjnc_
  • Heterogens: COA, EP1, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1rjnA (A:)
msyyhhhhhhnynipttenlyfqgamvapageqgrsstalsdnpfdakawrlvdgfddlt
dityhrhvddatvrvafnrpevrnafrphtvdelyrvldharmspdvgvvlltgngpspk
dggwafcsggdqrirgrsgyqyasgdtadtvdvaragrlhilevqrlirfmpkvviclvn
gwaaggghslhvvcdltlasreyarfkqtdadvgsfdggygsaylarqvgqkfareiffl
grtytaeqmhqmgavnavaehaeletvglqwaaeinakspqaqrmlkfafnllddglvgq
qlfageatrlaymtdeavegrdaflqkrppdwspfpryf

    Sequence, based on observed residues (ATOM records): (download) 
    >1rjnA (A:)
dnpfdakawrlvdgfddltdityhrhvddatvrvafnrpevrnafrphtvdelyrvldha
rmspdvgvvlltgngpspkdggwafcsggdqaragrlhilevqrlirfmpkvviclvngw
aaggghslhvvcdltlasreyarfkqtdadvgsfdggygsaylarqvgqkfareifflgr
tytaeqmhqmgavnavaehaeletvglqwaaeinakspqaqrmlkfafnllddglvgqql
fageatrlaymtdeavegr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1rjnB (B:)
msyyhhhhhhnynipttenlyfqgamvapageqgrsstalsdnpfdakawrlvdgfddlt
dityhrhvddatvrvafnrpevrnafrphtvdelyrvldharmspdvgvvlltgngpspk
dggwafcsggdqrirgrsgyqyasgdtadtvdvaragrlhilevqrlirfmpkvviclvn
gwaaggghslhvvcdltlasreyarfkqtdadvgsfdggygsaylarqvgqkfareiffl
grtytaeqmhqmgavnavaehaeletvglqwaaeinakspqaqrmlkfafnllddglvgq
qlfageatrlaymtdeavegrdaflqkrppdwspfpryf

    Sequence, based on observed residues (ATOM records): (download) 
    >1rjnB (B:)
alsdnpfdakawrlvdgfddltdityhrhvddatvrvafnrpevrnafrphtvdelyrvl
dharmspdvgvvlltgngpspkdggwafcsggdqrhilevqrlirfmpkvviclvngwaa
ggghslhvvcdltlasreyarfkqtdadvgsfdggygsaylarqvgqkfareifflgrty
taeqmhqmgavnavaehaeletvglqwaaeinakspqaqrmlkfafnllddglvgqqlfa
geatrlaymtdeavegrdaflqkrppdwspfpryf

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1rjnC (C:)
msyyhhhhhhnynipttenlyfqgamvapageqgrsstalsdnpfdakawrlvdgfddlt
dityhrhvddatvrvafnrpevrnafrphtvdelyrvldharmspdvgvvlltgngpspk
dggwafcsggdqrirgrsgyqyasgdtadtvdvaragrlhilevqrlirfmpkvviclvn
gwaaggghslhvvcdltlasreyarfkqtdadvgsfdggygsaylarqvgqkfareiffl
grtytaeqmhqmgavnavaehaeletvglqwaaeinakspqaqrmlkfafnllddglvgq
qlfageatrlaymtdeavegrdaflqkrppdwspfpryf

    Sequence, based on observed residues (ATOM records): (download) 
    >1rjnC (C:)
alsdnpfdakawrlvdgfddltdityhrhvddatvrvafnrpevrnafrphtvdelyrvl
dharmspdvgvvlltgngpspkdggwafcsggdlhilevqrlirfmpkvviclvngwaag
gghslhvvcdltlasreyarfkqtdadvgsfdggygsaylarqvgqkfareifflgrtyt
aeqmhqmgavnavaehaeletvglqwaaeinakspqaqrmlkfafnllddglvgqqlfag
eatrl