PDB entry 1rfy

View 1rfy on RCSB PDB site
Description: Crystal Structure of Quorum-Sensing Antiactivator TraM
Class: transcription
Keywords: inter- and intra-molcular two-helix coiled coil; homodimer, TRANSCRIPTION
Deposited on 2003-11-10, released 2004-11-23
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.202
AEROSPACI score: 0.6 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: transcriptional repressor tram
    Species: Agrobacterium tumefaciens [TaxId:358]
    Gene: traM
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q57471
      • conflict (89)
    Domains in SCOPe 2.06: d1rfya_
  • Chain 'B':
    Compound: transcriptional repressor tram
    Species: Agrobacterium tumefaciens [TaxId:358]
    Gene: traM
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q57471
      • conflict (89)
    Domains in SCOPe 2.06: d1rfyb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1rfyA (A:)
meledanvtkkvelrpligltrglpptdletitidairthrrlvekadelfqalpetykt
gqacggpqhiryieasiemhaqmsalntlisilgfipkvvvn

    Sequence, based on observed residues (ATOM records): (download) 
    >1rfyA (A:)
kkvelrpligltrglpptdletitidairthrrlvekadelfqalpetyktgqacggpqh
iryieasiemhaqmsalntlisilgfipk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1rfyB (B:)
meledanvtkkvelrpligltrglpptdletitidairthrrlvekadelfqalpetykt
gqacggpqhiryieasiemhaqmsalntlisilgfipkvvvn

    Sequence, based on observed residues (ATOM records): (download) 
    >1rfyB (B:)
velrpligltrglpptdletitidairthrrlvekadelfqalpetyktgqacggpqhir
yieasiemhaqmsalntlisilgfipkv